RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 IGHV3-35A0A0C4DH35 117 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 MDFIC2A0A1B0GVS7 189 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 HLA-DQA1P01909 254 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 CHTF8P0CG12 524 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 REG3AQ06141 175 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 C10orf25Q5T742 122 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 SIGLECL1Q8N7X8 197 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 DNAH10Q8IVF4 4471 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 CADP27708 2225 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 USP9XQ93008 2570 aaPredicted RBP2.67□□□□□ -1.98
MCF2-203ENST00000370576 MYO9AB2RTY4 2548 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 F2Z2F3 143 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 IL4P05112 153 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 RNASE3P12724 160 aaKnown RBP2.67□□□□□ -1.98
MCF2-203ENST00000370576 CMC4P56277 68 aaPredicted RBP2.67□□□□□ -1.98
MCF2-203ENST00000370576 DEFB114Q30KQ6 69 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 SDIM1Q6ZPB5 146 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 RNF182Q8N6D2 247 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 LINC01006Q8NI28 216 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 C20orf78Q9BR46 151 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 TRBV20-1A0A075B6N2 111 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 PRAC2D3DTV9 90 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 F8W1H4 67 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 PRH1P02810 166 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 ZNF688P0C7X2 276 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 FABP4P15090 132 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 C7orf33Q8WU49 177 aa2.67□□□□□ -1.98
MCF2-203ENST00000370576 USP9YO00507 2555 aaPredicted RBP2.67□□□□□ -1.98
MCF2-203ENST00000370576 ZNF705FA8MVS1 300 aaPredicted RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 TMEM256-PLSCR3K7ERE1 68 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 TCL1BO95988 128 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 TRGC1P0CF51 173 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 ZNF705DP0CH99 300 aaPredicted RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 ZNF705BP0CI00 300 aaPredicted RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 BVES-AS1Q5T3Y7 98 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 MRPL54Q6P161 138 aaKnown RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 EBLN2Q6P2I7 272 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 REG3GQ6UW15 175 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 GTF2H5Q6ZYL4 71 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 VAMP8Q9BV40 100 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 ZNF706Q9Y5V0 76 aaPredicted RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 MUC4Q99102 2169 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 HECTD1Q9ULT8 2610 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 FAT2Q9NYQ8 4349 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 SH2D1AO60880 128 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 MORN3Q6PF18 240 aaPredicted RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 BRD3OSQ6XYD6 125 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 VGLL1Q99990 258 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 TACC2O95359 2948 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 J3QR89 54 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 CBLN1P23435 193 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 RBMY1FQ15415 496 aaKnown RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 SS18Q15532 418 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 Q56UQ5 140 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 NFE4Q86UQ8 179 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 C10orf126Q8N4M7 172 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 C18orf32Q8TCD1 76 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 FAM103A1Q9BTL3 118 aaKnown RBP2.66□□□□□ -1.98
MCF2-203ENST00000370576 UQCR10Q9UDW1 63 aa2.66□□□□□ -1.98
MCF2-203ENST00000370576 NUPR1O60356 82 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 SNRPD3P62318 126 aaKnown RBP2.65□□□□□ -1.98
MCF2-203ENST00000370576 C9orf66Q5T8R8 295 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 FAM104BQ5XKR9 115 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 ZFP2Q6ZN57 461 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 PRAC1Q96KF2 57 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 LINC00479Q96M42 142 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 ITPR2Q14571 2701 aa2.65□□□□□ -1.98
MCF2-203ENST00000370576 FAM181BA6NEQ2 426 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 A8MWL6 223 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 TRGV3P03979 118 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 COX7CP15954 63 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 ADM2Q7Z4H4 148 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 AMN1Q8IY45 258 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 TMEM61Q8N0U2 210 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 Q8NDZ9 215 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 OR8A1Q8NGG7 326 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 C8orf49Q96NF6 230 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 LRRK2Q5S007 2527 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 TRAV13-1A0A0B4J241 112 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 H3BMM0 161 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 CD24P25063 80 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 RPS10P5Q9NQ39 176 aa2.65□□□□□ -1.99
MCF2-203ENST00000370576 TEP1Q99973 2627 aaKnown RBP2.64□□□□□ -1.99
MCF2-203ENST00000370576 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 LINC01549A6NIU2 74 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 SPINK4O60575 86 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 PSMB2P49721 201 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 POLR2KP53803 58 aaKnown RBP2.64□□□□□ -1.99
MCF2-203ENST00000370576 HBBP68871 147 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 HES1Q14469 280 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 C7orf65Q6ZTY9 151 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 BAGE2Q86Y30 109 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 SPTBN1Q01082 2364 aaKnown RBP2.64□□□□□ -1.99
MCF2-203ENST00000370576 H3BMG7 143 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 C3orf84H3BNL1 204 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 H3BRM9 83 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 PRB3Q04118 309 aaPredicted RBP2.64□□□□□ -1.99
MCF2-203ENST00000370576 C10orf99Q6UWK7 81 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 Q8N8P6 123 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms