RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 KNCNA6PVL3 124 aa11.15□□□□□ -0.62
PHTF1-202ENST00000369598 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
PHTF1-202ENST00000369598 SMCR5Q8TEV8 140 aa11.15□□□□□ -0.62
PHTF1-202ENST00000369598 MRPL53Q96EL3 112 aaKnown RBP11.15□□□□□ -0.62
PHTF1-202ENST00000369598 NXPH4O95158 308 aa11.15□□□□□ -0.62
PHTF1-202ENST00000369598 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.62
PHTF1-202ENST00000369598 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
PHTF1-202ENST00000369598 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 A0A087WW49 117 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.14□□□□□ -0.63
PHTF1-202ENST00000369598 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
PHTF1-202ENST00000369598 PROK1P58294 105 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 LINC00315P59091 139 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 RHOHQ15669 191 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 A0A0B4J2C4 111 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 LEPROTO15243 131 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 ESM1Q9NQ30 184 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
PHTF1-202ENST00000369598 NOTCH2Q04721 2471 aa11.13□□□□□ -0.63
PHTF1-202ENST00000369598 CD28P10747 220 aa11.13□□□□□ -0.63
PHTF1-202ENST00000369598 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
PHTF1-202ENST00000369598 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
PHTF1-202ENST00000369598 SMR3AQ99954 134 aa11.13□□□□□ -0.63
PHTF1-202ENST00000369598 Q6Q795 121 aa11.12□□□□□ -0.63
PHTF1-202ENST00000369598 FAM19A5Q7Z5A7 132 aaPredicted RBP11.12□□□□□ -0.63
PHTF1-202ENST00000369598 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
PHTF1-202ENST00000369598 CYSTM1Q9H1C7 97 aa11.12□□□□□ -0.63
PHTF1-202ENST00000369598 IGHV3-38A0A0C4DH36 116 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 C18orf65Q6ZTR6 163 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 TRBV30A0A0K0K1B3 111 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 SOCS3O14543 225 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 GAGE2AQ6NT46 116 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 DEFB136Q30KP8 78 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 Q9HAA7 133 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 JMJD1CQ15652 2540 aa11.11□□□□□ -0.63
PHTF1-202ENST00000369598 POM121L12Q8N7R1 296 aa11.1□□□□□ -0.63
PHTF1-202ENST00000369598 OVOL1O14753 267 aa11.1□□□□□ -0.63
PHTF1-202ENST00000369598 NDUFA7O95182 113 aa11.1□□□□□ -0.63
PHTF1-202ENST00000369598 KIR2DL5BQ8NHK3 375 aa11.1□□□□□ -0.63
PHTF1-202ENST00000369598 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
PHTF1-202ENST00000369598 KIF25-AS1Q9Y6Z4 181 aa11.1□□□□□ -0.63
PHTF1-202ENST00000369598 MTORP42345 2549 aa11.09□□□□□ -0.63
PHTF1-202ENST00000369598 IGLV4-3A0A075B6K6 122 aa11.09□□□□□ -0.63
PHTF1-202ENST00000369598 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
PHTF1-202ENST00000369598 SDIM1Q6ZPB5 146 aa11.09□□□□□ -0.63
PHTF1-202ENST00000369598 NF1P21359 2839 aa11.08□□□□□ -0.63
PHTF1-202ENST00000369598 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
PHTF1-202ENST00000369598 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
PHTF1-202ENST00000369598 SLURP1P55000 103 aa11.08□□□□□ -0.64
PHTF1-202ENST00000369598 C4orf3Q8WVX3 66 aa11.08□□□□□ -0.64
PHTF1-202ENST00000369598 LY6G6DO95868 133 aa11.07□□□□□ -0.64
PHTF1-202ENST00000369598 RNASE1P07998 156 aaKnown RBP11.07□□□□□ -0.64
PHTF1-202ENST00000369598 HIVEP2P31629 2446 aa11.07□□□□□ -0.64
PHTF1-202ENST00000369598 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
PHTF1-202ENST00000369598 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
PHTF1-202ENST00000369598 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
PHTF1-202ENST00000369598 DAZ4Q86SG3 579 aaKnown RBP11.07□□□□□ -0.64
PHTF1-202ENST00000369598 LITAFQ99732 161 aa11.07□□□□□ -0.64
PHTF1-202ENST00000369598 TMEM126AQ9H061 195 aa11.07□□□□□ -0.64
PHTF1-202ENST00000369598 DAZ3Q9NR90 486 aaKnown RBP11.07□□□□□ -0.64
PHTF1-202ENST00000369598 A0A087WVE0 104 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 LST1O00453 97 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 C3orf22Q8N5N4 141 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 C11orf44Q8N8P7 122 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 DCANP1Q8TF63 244 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 PPP1R17O96001 155 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 DSCR8Q96T75 97 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
PHTF1-202ENST00000369598 C20orf203Q8NBC4 194 aa11.05□□□□□ -0.64
PHTF1-202ENST00000369598 M0QY20 66 aa11.05□□□□□ -0.64
PHTF1-202ENST00000369598 TRBV27A0A0K0K1C4 114 aa11.04□□□□□ -0.64
PHTF1-202ENST00000369598 H3BT86 120 aa11.04□□□□□ -0.64
PHTF1-202ENST00000369598 HILS1P60008 231 aa11.04□□□□□ -0.64
PHTF1-202ENST00000369598 TMEM61Q8N0U2 210 aa11.04□□□□□ -0.64
PHTF1-202ENST00000369598 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
PHTF1-202ENST00000369598 PEMTQ9UBM1 199 aa11.04□□□□□ -0.64
PHTF1-202ENST00000369598 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
PHTF1-202ENST00000369598 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
PHTF1-202ENST00000369598 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
PHTF1-202ENST00000369598 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
PHTF1-202ENST00000369598 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
PHTF1-202ENST00000369598 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
PHTF1-202ENST00000369598 BAALC-AS2P0C853 105 aa11.02□□□□□ -0.65
PHTF1-202ENST00000369598 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
PHTF1-202ENST00000369598 TRBV7-7A0A0K0K1E9 115 aa11.01□□□□□ -0.65
PHTF1-202ENST00000369598 K7EQG2 157 aa11.01□□□□□ -0.65
PHTF1-202ENST00000369598 MIAQ16674 131 aa11.01□□□□□ -0.65
PHTF1-202ENST00000369598 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
PHTF1-202ENST00000369598 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
PHTF1-202ENST00000369598 OTOGQ6ZRI0 2925 aa11□□□□□ -0.65
PHTF1-202ENST00000369598 UQCRQO14949 82 aa11□□□□□ -0.65
PHTF1-202ENST00000369598 TIRAPP58753 221 aa11□□□□□ -0.65
PHTF1-202ENST00000369598 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
PHTF1-202ENST00000369598 ANK3Q12955 4377 aaKnown RBP10.99□□□□□ -0.65
PHTF1-202ENST00000369598 IGHV1-58A0A0C4DH39 117 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms