RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TNFRSF18Q9Y5U5 241 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 CREBBPQ92793 2442 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 ATP5G1P05496 136 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 EDN2P20800 178 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
CHTOP-203ENST00000368690 SDIM1Q6ZPB5 146 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 CHCHD7Q9BUK0 85 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 COX7A2LO14548 114 aa12.69□□□□□ -0.38
CHTOP-203ENST00000368690 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
CHTOP-203ENST00000368690 LINC00643Q86TS7 51 aa12.69□□□□□ -0.38
CHTOP-203ENST00000368690 CITED2Q99967 270 aaPredicted RBP12.69□□□□□ -0.38
CHTOP-203ENST00000368690 AVPP01185 164 aa12.68□□□□□ -0.38
CHTOP-203ENST00000368690 CEMP1Q6PRD7 247 aaPredicted RBP12.68□□□□□ -0.38
CHTOP-203ENST00000368690 WFDC11Q8NEX6 87 aa12.67□□□□□ -0.38
CHTOP-203ENST00000368690 NPC2P61916 151 aa12.67□□□□□ -0.38
CHTOP-203ENST00000368690 LY6EQ16553 131 aa12.67□□□□□ -0.38
CHTOP-203ENST00000368690 PPDPFQ9H3Y8 114 aa12.67□□□□□ -0.38
CHTOP-203ENST00000368690 H3BUX3 64 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 TRACP01848 142 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 KRTAP1-3Q8IUG1 177 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 CR1P17927 2039 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 FAM236AA0A1B0GUQ0 79 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 FAM236BA0A1B0GV22 79 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 BLCAPP62952 87 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
CHTOP-203ENST00000368690 ITPR3Q14573 2671 aa12.65□□□□□ -0.38
CHTOP-203ENST00000368690 ZNF469Q96JG9 3925 aaPredicted RBP12.65□□□□□ -0.38
CHTOP-203ENST00000368690 A8MZ25 164 aa12.65□□□□□ -0.38
CHTOP-203ENST00000368690 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
CHTOP-203ENST00000368690 CXCL5P42830 114 aa12.64□□□□□ -0.39
CHTOP-203ENST00000368690 RNASE13Q5GAN3 156 aaKnown RBP12.64□□□□□ -0.39
CHTOP-203ENST00000368690 PDZD2O15018 2839 aa12.64□□□□□ -0.39
CHTOP-203ENST00000368690 TEX15Q9BXT5 2789 aa12.64□□□□□ -0.39
CHTOP-203ENST00000368690 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
CHTOP-203ENST00000368690 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 PSMB8P28062 276 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 FAM222AQ5U5X8 452 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 C3orf22Q8N5N4 141 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 CDKN2A-AS1Q9UH64 79 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 DAND5Q8N907 189 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 PEMTQ9UBM1 199 aa12.63□□□□□ -0.39
CHTOP-203ENST00000368690 J3QLI3 93 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 UQCRQO14949 82 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 BEAN1Q3B7T3 259 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 A8MTW9 85 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 PROK1P58294 105 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 FAM19A3Q7Z5A8 133 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 LINC00467Q9BRT7 94 aa12.62□□□□□ -0.39
CHTOP-203ENST00000368690 FLNAP21333 2647 aaKnown RBP12.61□□□□□ -0.39
CHTOP-203ENST00000368690 SMCR5Q8TEV8 140 aa12.61□□□□□ -0.39
CHTOP-203ENST00000368690 IGHV3-73A0A0B4J1V6 119 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 HERVK_113P63121 156 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 C5orf38Q86SI9 138 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 DUX5Q96PT3 197 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 TLN2Q9Y4G6 2542 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.6□□□□□ -0.39
CHTOP-203ENST00000368690 IGKV2-29A2NJV5 120 aaPredicted RBP12.6□□□□□ -0.39
CHTOP-203ENST00000368690 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
CHTOP-203ENST00000368690 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 RBMY1FQ15415 496 aaKnown RBP12.6□□□□□ -0.39
CHTOP-203ENST00000368690 LINC00526Q96FQ7 95 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 VPREB3Q9UKI3 123 aa12.6□□□□□ -0.39
CHTOP-203ENST00000368690 NDUFA7O95182 113 aa12.59□□□□□ -0.39
CHTOP-203ENST00000368690 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
CHTOP-203ENST00000368690 INAFM2P0DMQ5 153 aa12.59□□□□□ -0.39
CHTOP-203ENST00000368690 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
CHTOP-203ENST00000368690 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
CHTOP-203ENST00000368690 Q9H8V8 135 aa12.59□□□□□ -0.39
CHTOP-203ENST00000368690 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
CHTOP-203ENST00000368690 NACAE9PAV3 2078 aa12.59□□□□□ -0.39
CHTOP-203ENST00000368690 ZNF415Q09FC8 603 aa12.58□□□□□ -0.4
CHTOP-203ENST00000368690 C9orf153Q5TBE3 101 aa12.58□□□□□ -0.4
CHTOP-203ENST00000368690 NOTCH2Q04721 2471 aa12.58□□□□□ -0.4
CHTOP-203ENST00000368690 BAALC-AS2P0C853 105 aa12.57□□□□□ -0.4
CHTOP-203ENST00000368690 TMEM95Q3KNT9 176 aa12.57□□□□□ -0.4
CHTOP-203ENST00000368690 Q6ZSN1 163 aa12.57□□□□□ -0.4
CHTOP-203ENST00000368690 DEFB112Q30KQ8 113 aa12.56□□□□□ -0.4
CHTOP-203ENST00000368690 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-203ENST00000368690 PF4P02776 101 aa12.55□□□□□ -0.4
CHTOP-203ENST00000368690 SOSTDC1Q6X4U4 206 aa12.55□□□□□ -0.4
CHTOP-203ENST00000368690 C22orf24Q9Y442 160 aa12.55□□□□□ -0.4
CHTOP-203ENST00000368690 Q9UF83 564 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 MXRA5Q9NR99 2828 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 IGHV3OR16-12A0A075B7B8 117 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 COX6A2Q02221 97 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 LINC00242Q5T6M2 205 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 Q8N2B8 174 aa12.54□□□□□ -0.4
CHTOP-203ENST00000368690 ZNF625Q96I27 306 aaPredicted RBP12.54□□□□□ -0.4
CHTOP-203ENST00000368690 KNCNA6PVL3 124 aa12.53□□□□□ -0.4
CHTOP-203ENST00000368690 HIST1H4AP62805 103 aaKnown RBP12.53□□□□□ -0.4
CHTOP-203ENST00000368690 CSDC2Q9Y534 153 aaKnown RBP12.53□□□□□ -0.4
CHTOP-203ENST00000368690 SMIM1B2RUZ4 78 aa12.53□□□□□ -0.4
CHTOP-203ENST00000368690 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
CHTOP-203ENST00000368690 COX7CP15954 63 aa12.53□□□□□ -0.4
CHTOP-203ENST00000368690 A0A1B0GX51 115 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms