RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 Q8IZM0 81 aa5.94□□□□□ -1.46
SSR2-202ENST00000368311 EP400Q96L91 3159 aa5.94□□□□□ -1.46
SSR2-202ENST00000368311 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
SSR2-202ENST00000368311 FAM19A2Q8N3H0 131 aa5.94□□□□□ -1.46
SSR2-202ENST00000368311 RPL39LQ96EH5 51 aaKnown RBP5.94□□□□□ -1.46
SSR2-202ENST00000368311 FREM1Q5H8C1 2179 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 Q6ZPA2 131 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 NAV3Q8IVL0 2385 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 B5MCH6 92 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 IGF2RP11717 2491 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 HCFC1P51610 2035 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 SND1-IT1Q9HBX3 110 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 ORMDL1Q9P0S3 153 aa5.93□□□□□ -1.46
SSR2-202ENST00000368311 CACNA1AO00555 2505 aa5.92□□□□□ -1.46
SSR2-202ENST00000368311 COA6Q5JTJ3 125 aaKnown RBP5.92□□□□□ -1.46
SSR2-202ENST00000368311 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
SSR2-202ENST00000368311 LINC00959A0A1B0GUT2 108 aa5.92□□□□□ -1.46
SSR2-202ENST00000368311 K7EN84 100 aa5.91□□□□□ -1.46
SSR2-202ENST00000368311 MRPS12O15235 138 aaKnown RBP5.91□□□□□ -1.46
SSR2-202ENST00000368311 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
SSR2-202ENST00000368311 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
SSR2-202ENST00000368311 MPV17L2Q567V2 206 aa5.91□□□□□ -1.46
SSR2-202ENST00000368311 KIAA2026Q5HYC2 2103 aa5.9□□□□□ -1.46
SSR2-202ENST00000368311 ADCYAP1P18509 176 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 LINC01620Q4KN68 170 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 Q8NAQ8 132 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 BAALCQ8WXS3 180 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 UPK3BQ9BT76 320 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 CNFNQ9BYD5 112 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 CADP27708 2225 aa5.9□□□□□ -1.47
SSR2-202ENST00000368311 TIMM17BO60830 172 aa5.89□□□□□ -1.47
SSR2-202ENST00000368311 RNASE3P12724 160 aaKnown RBP5.89□□□□□ -1.47
SSR2-202ENST00000368311 Q6ZUT4 128 aa5.89□□□□□ -1.47
SSR2-202ENST00000368311 MRPL35Q9NZE8 188 aaKnown RBP5.89□□□□□ -1.47
SSR2-202ENST00000368311 PLA2G2EQ9NZK7 142 aa5.89□□□□□ -1.47
SSR2-202ENST00000368311 X6R8D5 127 aa5.89□□□□□ -1.47
SSR2-202ENST00000368311 FAM19A5Q7Z5A7 132 aaPredicted RBP5.88□□□□□ -1.47
SSR2-202ENST00000368311 ZNF80P51504 273 aaPredicted RBP5.88□□□□□ -1.47
SSR2-202ENST00000368311 KRTAP10-11P60412 298 aa5.88□□□□□ -1.47
SSR2-202ENST00000368311 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
SSR2-202ENST00000368311 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
SSR2-202ENST00000368311 AKAP6Q13023 2319 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 WNK2Q9Y3S1 2297 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 PRYO14603 147 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 A0A0J9YXV3 536 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 NDUFC2O95298 119 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 IGLC3P0DOY3 106 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 Q6ZRP5 223 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 LRCOL1A6NCL2 159 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 DEFB1P60022 68 aa5.87□□□□□ -1.47
SSR2-202ENST00000368311 NBASA2RRP1 2371 aa5.86□□□□□ -1.47
SSR2-202ENST00000368311 COL27A1Q8IZC6 1860 aaPredicted RBP5.86□□□□□ -1.47
SSR2-202ENST00000368311 RTL8CO15255 209 aa5.86□□□□□ -1.47
SSR2-202ENST00000368311 PRB4P10163 310 aaPredicted RBP5.86□□□□□ -1.47
SSR2-202ENST00000368311 SPCS1Q9Y6A9 102 aa5.86□□□□□ -1.47
SSR2-202ENST00000368311 Q6JHZ5 121 aa5.86□□□□□ -1.47
SSR2-202ENST00000368311 E9PLD3 99 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 NPC2P61916 151 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.85□□□□□ -1.471e-6■■□□□ 12.3
SSR2-202ENST00000368311 A8MTW9 85 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 SRSF3P84103 164 aaKnown RBP5.85□□□□□ -1.47
SSR2-202ENST00000368311 RNASE13Q5GAN3 156 aaKnown RBP5.85□□□□□ -1.47
SSR2-202ENST00000368311 C1orf195Q5TG92 126 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 PRO1854Q9UHT4 67 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 LINC00337Q8N6G1 96 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 HIGD2AQ9BW72 106 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 CDC42SE2Q9NRR3 84 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 ATRXP46100 2492 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 C2orf82Q6UX34 121 aa5.85□□□□□ -1.47
SSR2-202ENST00000368311 J3KT08 172 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 RPL37AP61513 92 aaKnown RBP5.84□□□□□ -1.47
SSR2-202ENST00000368311 IGLV4-3A0A075B6K6 122 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 A0A1B0GX51 115 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 A0A1B0GXF2 115 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 TMEM256-PLSCR3K7ERE1 68 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 NCR3O14931 201 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 TSHBP01222 138 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 IGLV2-11P01706 119 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
SSR2-202ENST00000368311 ANKRD29Q8N6D5 301 aa5.84□□□□□ -1.48
SSR2-202ENST00000368311 ROS1P08922 2347 aa5.84□□□□□ -1.48
SSR2-202ENST00000368311 ABCA1O95477 2261 aa5.84□□□□□ -1.48
SSR2-202ENST00000368311 DOCK11Q5JSL3 2073 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 TRACP01848 142 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 ATOH7Q8N100 152 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 ARFGEF3Q5TH69 2177 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 PPDPFLQ8WWR9 84 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 FAM19A4Q96LR4 140 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 LINC00476Q8WZB0 136 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 CELA1Q9UNI1 258 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 ABCA2Q9BZC7 2435 aa5.83□□□□□ -1.48
SSR2-202ENST00000368311 F8W1H4 67 aa5.82□□□□□ -1.48
SSR2-202ENST00000368311 POLR2KP53803 58 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms