RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 CRYBA4P53673 196 aa12.92□□□□□ -0.34
LMNA-207ENST00000368301 DAZ2Q13117 558 aaKnown RBP12.92□□□□□ -0.34
LMNA-207ENST00000368301 SPANXB1Q9NS25 103 aaPredicted RBP12.92□□□□□ -0.34
LMNA-207ENST00000368301 PF4P02776 101 aa12.91□□□□□ -0.34
LMNA-207ENST00000368301 NDUFA11Q86Y39 141 aa12.91□□□□□ -0.34
LMNA-207ENST00000368301 SFTA2Q6UW10 78 aa12.91□□□□□ -0.34
LMNA-207ENST00000368301 LINC00482Q8N8I6 264 aa12.91□□□□□ -0.34
LMNA-207ENST00000368301 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
LMNA-207ENST00000368301 LOC100131303A0A0U1RQF7 123 aa12.9□□□□□ -0.34
LMNA-207ENST00000368301 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
LMNA-207ENST00000368301 C16orf74Q96GX8 76 aa12.9□□□□□ -0.34
LMNA-207ENST00000368301 TMEM238LA0A1B0GVL6 79 aa12.9□□□□□ -0.34
LMNA-207ENST00000368301 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
LMNA-207ENST00000368301 A6NJY4 79 aa12.9□□□□□ -0.34
LMNA-207ENST00000368301 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
LMNA-207ENST00000368301 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
LMNA-207ENST00000368301 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
LMNA-207ENST00000368301 TRGV2A0A075B6R0 118 aa12.89□□□□□ -0.35
LMNA-207ENST00000368301 H3BMG7 143 aa12.89□□□□□ -0.35
LMNA-207ENST00000368301 TSPAN13O95857 204 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 CFC1BP0CG36 223 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 CFC1P0CG37 223 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 UBE2D3P61077 147 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 UBE2D2P62837 147 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 A0A0J9YXY3 114 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 TRBV10-1A0A0K0K1A3 114 aa12.88□□□□□ -0.35
LMNA-207ENST00000368301 IGHV1-58A0A0C4DH39 117 aa12.87□□□□□ -0.35
LMNA-207ENST00000368301 DGAT2L7PQ6IED9 249 aa12.87□□□□□ -0.35
LMNA-207ENST00000368301 MTURNQ8N3F0 131 aa12.87□□□□□ -0.35
LMNA-207ENST00000368301 EIF4EBP3O60516 100 aaPredicted RBP12.87□□□□□ -0.35
LMNA-207ENST00000368301 COX6A2Q02221 97 aa12.87□□□□□ -0.35
LMNA-207ENST00000368301 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
LMNA-207ENST00000368301 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
LMNA-207ENST00000368301 VSIG2Q96IQ7 327 aa12.86□□□□□ -0.35
LMNA-207ENST00000368301 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
LMNA-207ENST00000368301 OVOL2Q9BRP0 275 aa12.85□□□□□ -0.35
LMNA-207ENST00000368301 GEMIN7Q9H840 131 aaKnown RBP12.85□□□□□ -0.35
LMNA-207ENST00000368301 A4D1N5 150 aa12.85□□□□□ -0.35
LMNA-207ENST00000368301 DAZ4Q86SG3 579 aaKnown RBP12.85□□□□□ -0.35
LMNA-207ENST00000368301 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
LMNA-207ENST00000368301 SBSPONQ8IVN8 264 aa12.85□□□□□ -0.35
LMNA-207ENST00000368301 DAZ3Q9NR90 486 aaKnown RBP12.85□□□□□ -0.35
LMNA-207ENST00000368301 ATRQ13535 2644 aa12.85□□□□□ -0.35
LMNA-207ENST00000368301 WFDC2Q14508 124 aa12.84□□□□□ -0.35
LMNA-207ENST00000368301 LITAFQ99732 161 aa12.84□□□□□ -0.35
LMNA-207ENST00000368301 NDUFA12Q9UI09 145 aa12.84□□□□□ -0.35
LMNA-207ENST00000368301 ADAMTSL4-AS1Q5T5F5 129 aa12.83□□□□□ -0.36
LMNA-207ENST00000368301 CRLF1O75462 422 aa12.82□□□□□ -0.36
LMNA-207ENST00000368301 LINC00242Q5T6M2 205 aa12.82□□□□□ -0.36
LMNA-207ENST00000368301 CBY1Q9Y3M2 126 aa12.82□□□□□ -0.36
LMNA-207ENST00000368301 LOC107984156A0A0G2JMH3 177 aa12.82□□□□□ -0.36
LMNA-207ENST00000368301 ARL17AQ8IVW1 177 aa12.82□□□□□ -0.36
LMNA-207ENST00000368301 TRGV4A0A0C4DH28 118 aa12.81□□□□□ -0.36
LMNA-207ENST00000368301 K7ERU9 68 aa12.81□□□□□ -0.36
LMNA-207ENST00000368301 TRAV13-1A0A0B4J241 112 aa12.81□□□□□ -0.36
LMNA-207ENST00000368301 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
LMNA-207ENST00000368301 FHL2Q14192 279 aa12.81□□□□□ -0.36
LMNA-207ENST00000368301 TMEM101Q96IK0 257 aa12.81□□□□□ -0.36
LMNA-207ENST00000368301 IGLV5-45A0A087WSX0 123 aa12.8□□□□□ -0.36
LMNA-207ENST00000368301 TIRAPP58753 221 aa12.8□□□□□ -0.36
LMNA-207ENST00000368301 PRO0461Q9UI25 63 aa12.8□□□□□ -0.36
LMNA-207ENST00000368301 TRBV6-4A0A1B0GX49 114 aa12.8□□□□□ -0.36
LMNA-207ENST00000368301 DEFB130BP0DP73 79 aa12.8□□□□□ -0.36
LMNA-207ENST00000368301 DEFB130AP0DP74 79 aa12.8□□□□□ -0.36
LMNA-207ENST00000368301 TEX48A0A1B0GUV7 120 aa12.79□□□□□ -0.36
LMNA-207ENST00000368301 RPL24P83731 157 aaKnown RBP12.79□□□□□ -0.36
LMNA-207ENST00000368301 VPS25Q9BRG1 176 aa12.79□□□□□ -0.36
LMNA-207ENST00000368301 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
LMNA-207ENST00000368301 TEP1Q99973 2627 aaKnown RBP12.79□□□□□ -0.36
LMNA-207ENST00000368301 PRO1854Q9UHT4 67 aa12.79□□□□□ -0.36
LMNA-207ENST00000368301 NPC2P61916 151 aa12.78□□□□□ -0.36
LMNA-207ENST00000368301 ZFAND6Q6FIF0 208 aa12.78□□□□□ -0.36
LMNA-207ENST00000368301 PSMB2P49721 201 aa12.78□□□□□ -0.36
LMNA-207ENST00000368301 TMEM243Q9BU79 118 aa12.78□□□□□ -0.36
LMNA-207ENST00000368301 CSDC2Q9Y534 153 aaKnown RBP12.78□□□□□ -0.36
LMNA-207ENST00000368301 F8W1H4 67 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 G3V4G9 280 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 PRSS2P07478 247 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 SH2D6Q7Z4S9 175 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 H7C2G1 150 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 GTSF1LQ9H1H1 148 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 X6R8D5 127 aa12.77□□□□□ -0.37
LMNA-207ENST00000368301 IGHV3-33P01772 117 aa12.76□□□□□ -0.37
LMNA-207ENST00000368301 HERVK_113P63121 156 aa12.76□□□□□ -0.37
LMNA-207ENST00000368301 DAND5Q8N907 189 aa12.76□□□□□ -0.37
LMNA-207ENST00000368301 UBE2L6O14933 153 aa12.75□□□□□ -0.37
LMNA-207ENST00000368301 GAGE6Q13070 117 aa12.75□□□□□ -0.37
LMNA-207ENST00000368301 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
LMNA-207ENST00000368301 IGLV5-39A0A0G2JS06 123 aa12.74□□□□□ -0.37
LMNA-207ENST00000368301 SMIM1B2RUZ4 78 aa12.74□□□□□ -0.37
LMNA-207ENST00000368301 TCL1BO95988 128 aa12.74□□□□□ -0.37
LMNA-207ENST00000368301 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
LMNA-207ENST00000368301 FAM19A3Q7Z5A8 133 aa12.73□□□□□ -0.37
LMNA-207ENST00000368301 A0A0B4J2C4 111 aa12.73□□□□□ -0.37
LMNA-207ENST00000368301 MIAQ16674 131 aa12.73□□□□□ -0.37
LMNA-207ENST00000368301 C9orf66Q5T8R8 295 aa12.73□□□□□ -0.37
LMNA-207ENST00000368301 ZNF625Q96I27 306 aaPredicted RBP12.73□□□□□ -0.37
LMNA-207ENST00000368301 SPANXDQ9BXN6 97 aa12.73□□□□□ -0.37
LMNA-207ENST00000368301 SPANXCQ9NY87 97 aa12.73□□□□□ -0.37
LMNA-207ENST00000368301 NDUFA1O15239 70 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms