RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 GNB1P62873 340 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 Q8NBF4 154 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 C11orf1Q9H5F2 150 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 RPP21Q9H633 154 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 ARFGEF3Q5TH69 2177 aa2.41□□□□□ -2.02
ECHDC1-205ENST00000368295 LRP2P98164 4655 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 HMSDA8MTL9 139 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 SOCS3O14543 225 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 LYRM1O43325 122 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 TIMM17BO60830 172 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 PIRTP0C851 137 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV1-8P0DP01 117 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 CKS2P33552 79 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 SPATA45Q537H7 98 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 SOSTDC1Q6X4U4 206 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 TMEM256Q8N2U0 113 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 PFN4Q8NHR9 129 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 LINC00467Q9BRT7 94 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 PROK2Q9HC23 129 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 RPS10P5Q9NQ39 176 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 HHLA3Q9XRX5 114 aa2.4□□□□□ -2.02
ECHDC1-205ENST00000368295 PMS2P5A8MQ11 134 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 ZNF737O75373 536 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 NPYP01303 97 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 KRTDAPP60985 99 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 CCL8P80075 99 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 SS18Q15532 418 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 GFI1BQ5VTD9 330 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 Q8N8P6 123 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 ZNF580Q9UK33 172 aa2.4□□□□□ -2.03
ECHDC1-205ENST00000368295 PKD1P98161 4303 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 IGLV11-55A0A075B6I3 123 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 TRAV14DV4A0A0A6YYC5 116 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 KANTRA0A1W2PQU2 76 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 C7orf77A4D0Y5 90 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 TMEM235A6NFC5 223 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 A6NN06 94 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 C17orf51A8MQB3 221 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 SYS1-DBNDD2H3BUS1 97 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 J3QLW9 94 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 IGHV1-69P01742 117 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 APCSP02743 223 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 PIPP12273 146 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 HOXB6P17509 224 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 FAUP35544 74 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 DYNLT1P63172 113 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 ZC2HC1BQ5TFG8 222 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 LINC00479Q96M42 142 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 NHP2Q9NX24 153 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
ECHDC1-205ENST00000368295 IGLV3-9A0A075B6K5 115 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 IGKV3D-20A0A0C4DH25 116 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 H0YGG7 62 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 CMC4P56277 68 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 ZNF345Q14585 488 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 KISS1Q15726 138 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 MIAQ16674 131 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 ZNF660Q6AZW8 331 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 ZFP2Q6ZN57 461 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 HMGN2P46Q86SG4 172 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 POM121L12Q8N7R1 296 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 C18orf32Q8TCD1 76 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 CLEC2BQ92478 149 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 CHCHD1Q96BP2 118 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 DSCAML1Q8TD84 2053 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 A0A1B0GUV1 79 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 IBA57-AS1B1ANH7 110 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 SIX6O95475 246 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 ETDBQ3ZM63 59 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 COMMD6Q7Z4G1 85 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 FAM213BQ8TBF2 198 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 MUCL1Q96DR8 90 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 AMELYQ99218 206 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 TRGV9Q99603 122 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 NABP2Q9BQ15 211 aa2.38□□□□□ -2.03
ECHDC1-205ENST00000368295 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 IGLV7-46A0A075B6I9 117 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 TRBV24-1A0A075B6N3 115 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 TRAV1-1A0A0B4J248 108 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 hADV29S1A0JD25 119 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 SLC25A20O43772 301 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 CGB3P0DN86 165 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 CGB7P0DN87 165 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 LYZP61626 148 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 RPL36AP83881 106 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 NMSQ5H8A3 153 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 C20orf203Q8NBC4 194 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 AQP3Q92482 292 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 TTTY13Q9BZ97 58 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 GABARAPL1Q9H0R8 117 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 CYTL1Q9NRR1 136 aa2.37□□□□□ -2.03
ECHDC1-205ENST00000368295 ZNF581Q9P0T4 197 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms