RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 BRI3O95415 125 aa9.9□□□□□ -0.82
PRKN-205ENST00000366897 DEFB136Q30KP8 78 aa9.9□□□□□ -0.82
PRKN-205ENST00000366897 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.82
PRKN-205ENST00000366897 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.82
PRKN-205ENST00000366897 ZNF469Q96JG9 3925 aaPredicted RBP9.9□□□□□ -0.82
PRKN-205ENST00000366897 IFITM1P13164 125 aa9.89□□□□□ -0.83
PRKN-205ENST00000366897 MAPK1IP1LQ8NDC0 245 aa9.89□□□□□ -0.83
PRKN-205ENST00000366897 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
PRKN-205ENST00000366897 ATP5J2P56134 94 aa9.89□□□□□ -0.83
PRKN-205ENST00000366897 MIAQ16674 131 aa9.89□□□□□ -0.83
PRKN-205ENST00000366897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.89□□□□□ -0.83
PRKN-205ENST00000366897 DEFB131AP59861 70 aa9.89□□□□□ -0.83
PRKN-205ENST00000366897 C10orf105Q8TEF2 133 aa9.88□□□□□ -0.83
PRKN-205ENST00000366897 CHCHD7Q9BUK0 85 aa9.88□□□□□ -0.83
PRKN-205ENST00000366897 MSMBP08118 114 aa9.88□□□□□ -0.83
PRKN-205ENST00000366897 DEFB112Q30KQ8 113 aa9.88□□□□□ -0.83
PRKN-205ENST00000366897 TMEM61Q8N0U2 210 aa9.88□□□□□ -0.83
PRKN-205ENST00000366897 CCL19Q99731 98 aa9.88□□□□□ -0.83
PRKN-205ENST00000366897 SONP18583 2426 aaKnown RBP9.87□□□□□ -0.83
PRKN-205ENST00000366897 TRGV11A0A075B6L2 103 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 M0QXV9 152 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 NDUFA7O95182 113 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 C18orf65Q6ZTR6 163 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 GAGE12JA6NER3 117 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 GAGE7O76087 117 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 COX6CP09669 75 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 GAGE12FP0CL80 117 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 GAGE12GP0CL81 117 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 GAGE12IP0CL82 117 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 GAGE4Q13068 117 aa9.87□□□□□ -0.83
PRKN-205ENST00000366897 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
PRKN-205ENST00000366897 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
PRKN-205ENST00000366897 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
PRKN-205ENST00000366897 HOXD3P31249 432 aaPredicted RBP9.86□□□□□ -0.83
PRKN-205ENST00000366897 COX6A2Q02221 97 aa9.86□□□□□ -0.83
PRKN-205ENST00000366897 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
PRKN-205ENST00000366897 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
PRKN-205ENST00000366897 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
PRKN-205ENST00000366897 NIPBLQ6KC79 2804 aaeCLIP9.85□□□□□ -0.83
PRKN-205ENST00000366897 TEP1Q99973 2627 aaKnown RBP9.85□□□□□ -0.83
PRKN-205ENST00000366897 LST1O00453 97 aa9.85□□□□□ -0.83
PRKN-205ENST00000366897 SLURP1P55000 103 aa9.85□□□□□ -0.83
PRKN-205ENST00000366897 HIVEP1P15822 2718 aa9.84□□□□□ -0.83
PRKN-205ENST00000366897 CITED2Q99967 270 aaPredicted RBP9.84□□□□□ -0.83
PRKN-205ENST00000366897 CHCHD5Q9BSY4 110 aa9.84□□□□□ -0.83
PRKN-205ENST00000366897 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
PRKN-205ENST00000366897 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
PRKN-205ENST00000366897 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
PRKN-205ENST00000366897 Q9H8V8 135 aa9.83□□□□□ -0.84
PRKN-205ENST00000366897 DGAT2L7PQ6IED9 249 aa9.83□□□□□ -0.84
PRKN-205ENST00000366897 Q8N2B8 174 aa9.83□□□□□ -0.84
PRKN-205ENST00000366897 F8P00451 2351 aa9.83□□□□□ -0.84
PRKN-205ENST00000366897 IGHV3OR16-12A0A075B7B8 117 aa9.82□□□□□ -0.84
PRKN-205ENST00000366897 H3BT86 120 aa9.82□□□□□ -0.84
PRKN-205ENST00000366897 SMIM20Q8N5G0 67 aa9.82□□□□□ -0.84
PRKN-205ENST00000366897 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
PRKN-205ENST00000366897 LINC01587Q99440 93 aa9.81□□□□□ -0.84
PRKN-205ENST00000366897 NF1P21359 2839 aa9.81□□□□□ -0.84
PRKN-205ENST00000366897 LINC00694P0DN24 101 aa9.81□□□□□ -0.84
PRKN-205ENST00000366897 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
PRKN-205ENST00000366897 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
PRKN-205ENST00000366897 IGHV3-53P01767 116 aa9.8□□□□□ -0.84
PRKN-205ENST00000366897 LINC00308Q8TCZ7 52 aa9.8□□□□□ -0.84
PRKN-205ENST00000366897 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
PRKN-205ENST00000366897 KHDC1LQ5JSQ8 128 aa9.79□□□□□ -0.84
PRKN-205ENST00000366897 YAE1D1Q9NRH1 226 aa9.79□□□□□ -0.84
PRKN-205ENST00000366897 ACANP16112 2415 aa9.78□□□□□ -0.84
PRKN-205ENST00000366897 DEFB113Q30KQ7 82 aa9.78□□□□□ -0.84
PRKN-205ENST00000366897 Q6Q795 121 aa9.78□□□□□ -0.84
PRKN-205ENST00000366897 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
PRKN-205ENST00000366897 XCL2Q9UBD3 114 aa9.78□□□□□ -0.84
PRKN-205ENST00000366897 B4DSR2 109 aa9.77□□□□□ -0.84
PRKN-205ENST00000366897 NDUFA1O15239 70 aa9.77□□□□□ -0.84
PRKN-205ENST00000366897 ZNF415Q09FC8 603 aa9.77□□□□□ -0.84
PRKN-205ENST00000366897 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.84
PRKN-205ENST00000366897 MTORP42345 2549 aa9.77□□□□□ -0.85
PRKN-205ENST00000366897 LINC00242Q5T6M2 205 aa9.77□□□□□ -0.85
PRKN-205ENST00000366897 SMCR5Q8TEV8 140 aa9.77□□□□□ -0.85
PRKN-205ENST00000366897 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
PRKN-205ENST00000366897 FLNAP21333 2647 aaKnown RBP9.76□□□□□ -0.85
PRKN-205ENST00000366897 FAM236AA0A1B0GUQ0 79 aa9.76□□□□□ -0.85
PRKN-205ENST00000366897 FAM236BA0A1B0GV22 79 aa9.76□□□□□ -0.85
PRKN-205ENST00000366897 CIRBPQ14011 172 aaKnown RBP9.76□□□□□ -0.85
PRKN-205ENST00000366897 PRIMA1Q86XR5 153 aa9.76□□□□□ -0.85
PRKN-205ENST00000366897 C11orf72Q8NBR9 251 aa9.76□□□□□ -0.85
PRKN-205ENST00000366897 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
PRKN-205ENST00000366897 Q9HAA7 133 aa9.75□□□□□ -0.85
PRKN-205ENST00000366897 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
PRKN-205ENST00000366897 FN1P02751 2386 aaKnown RBP9.74□□□□□ -0.85
PRKN-205ENST00000366897 HERV-K104P63124 156 aa9.74□□□□□ -0.85
PRKN-205ENST00000366897 DAZ2Q13117 558 aaKnown RBP9.74□□□□□ -0.85
PRKN-205ENST00000366897 DAZ4Q86SG3 579 aaKnown RBP9.74□□□□□ -0.85
PRKN-205ENST00000366897 DAZ3Q9NR90 486 aaKnown RBP9.74□□□□□ -0.85
PRKN-205ENST00000366897 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
PRKN-205ENST00000366897 IGKV3OR2-268A0A0C4DH90 116 aa9.74□□□□□ -0.85
PRKN-205ENST00000366897 WFDC11Q8NEX6 87 aa9.74□□□□□ -0.85
PRKN-205ENST00000366897 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
PRKN-205ENST00000366897 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
PRKN-205ENST00000366897 SHISA2Q6UWI4 295 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms