RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 PYGO1Q9Y3Y4 419 aa13.23□□□□□ -0.29
SMG5-201ENST00000361813 JMJD7-PLA2G4BH0Y9G9 81 aa13.22□□□□□ -0.29
SMG5-201ENST00000361813 C11orf71Q6IPW1 123 aa13.22□□□□□ -0.29
SMG5-201ENST00000361813 TRBV10-1A0A0K0K1A3 114 aa13.22□□□□□ -0.29
SMG5-201ENST00000361813 NDUFA1O15239 70 aa13.22□□□□□ -0.29
SMG5-201ENST00000361813 PKD1L2Q7Z442 2459 aa13.21□□□□□ -0.29
SMG5-201ENST00000361813 TRAV23DV6A0A075B6W5 121 aa13.21□□□□□ -0.29
SMG5-201ENST00000361813 TMEM89A2RUT3 159 aa13.21□□□□□ -0.29
SMG5-201ENST00000361813 SLPIP03973 132 aa13.21□□□□□ -0.29
SMG5-201ENST00000361813 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.3
SMG5-201ENST00000361813 RANBP2P49792 3224 aaKnown RBP13.21□□□□□ -0.3
SMG5-201ENST00000361813 Q6ZSV7 163 aa13.2□□□□□ -0.3
SMG5-201ENST00000361813 PTPRBP23467 1997 aa13.2□□□□□ -0.3
SMG5-201ENST00000361813 NCR3O14931 201 aa13.2□□□□□ -0.3
SMG5-201ENST00000361813 C3orf22Q8N5N4 141 aa13.2□□□□□ -0.3
SMG5-201ENST00000361813 PRO3102Q9H379 93 aa13.2□□□□□ -0.3
SMG5-201ENST00000361813 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
SMG5-201ENST00000361813 ZNF580Q9UK33 172 aa13.19□□□□□ -0.3
SMG5-201ENST00000361813 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
SMG5-201ENST00000361813 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
SMG5-201ENST00000361813 MRAPQ8TCY5 172 aa13.19□□□□□ -0.3
SMG5-201ENST00000361813 F8WEM9 126 aa13.18□□□□□ -0.3
SMG5-201ENST00000361813 C19orf84I3L1E1 186 aa13.18□□□□□ -0.3
SMG5-201ENST00000361813 TIRAPP58753 221 aa13.18□□□□□ -0.3
SMG5-201ENST00000361813 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
SMG5-201ENST00000361813 EDN2P20800 178 aa13.17□□□□□ -0.3
SMG5-201ENST00000361813 CDIP1Q9H305 208 aa13.17□□□□□ -0.3
SMG5-201ENST00000361813 CDSNQ15517 529 aa13.16□□□□□ -0.3
SMG5-201ENST00000361813 DEFB105AQ8NG35 78 aa13.16□□□□□ -0.3
SMG5-201ENST00000361813 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
SMG5-201ENST00000361813 C20orf197Q8N268 126 aa13.16□□□□□ -0.3
SMG5-201ENST00000361813 TMEM256-PLSCR3K7ERE1 68 aa13.15□□□□□ -0.3
SMG5-201ENST00000361813 BRCA2P51587 3418 aa13.15□□□□□ -0.3
SMG5-201ENST00000361813 MRPS36P82909 103 aaKnown RBP13.15□□□□□ -0.3
SMG5-201ENST00000361813 UBE2D4Q9Y2X8 147 aa13.15□□□□□ -0.3
SMG5-201ENST00000361813 MKI67P46013 3256 aaKnown RBP13.15□□□□□ -0.3
SMG5-201ENST00000361813 PRRC2AP48634 2157 aaKnown RBP13.14□□□□□ -0.31
SMG5-201ENST00000361813 TIMM17BO60830 172 aa13.14□□□□□ -0.31
SMG5-201ENST00000361813 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
SMG5-201ENST00000361813 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
SMG5-201ENST00000361813 NDUFA7O95182 113 aa13.13□□□□□ -0.31
SMG5-201ENST00000361813 IMUPQ9GZP8 106 aa13.12□□□□□ -0.31
SMG5-201ENST00000361813 ADAMTSL4-AS1Q5T5F5 129 aa13.12□□□□□ -0.31
SMG5-201ENST00000361813 DEFB4AO15263 64 aa13.11□□□□□ -0.31
SMG5-201ENST00000361813 C4orf3Q8WVX3 66 aa13.11□□□□□ -0.31
SMG5-201ENST00000361813 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
SMG5-201ENST00000361813 Q6Q795 121 aa13.1□□□□□ -0.31
SMG5-201ENST00000361813 SMCPP49901 116 aaPredicted RBP13.1□□□□□ -0.31
SMG5-201ENST00000361813 TMEM258P61165 79 aa13.1□□□□□ -0.31
SMG5-201ENST00000361813 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
SMG5-201ENST00000361813 DEFB114Q30KQ6 69 aa13.1□□□□□ -0.31
SMG5-201ENST00000361813 APOC4P55056 127 aa13.09□□□□□ -0.31
SMG5-201ENST00000361813 CFAP54Q96N23 3096 aa13.09□□□□□ -0.31
SMG5-201ENST00000361813 SPAG11BQ08648 103 aa13.09□□□□□ -0.31
SMG5-201ENST00000361813 CAMK2N2Q96S95 79 aa13.09□□□□□ -0.31
SMG5-201ENST00000361813 UPK3BQ9BT76 320 aa13.09□□□□□ -0.31
SMG5-201ENST00000361813 JMJD1CQ15652 2540 aa13.08□□□□□ -0.32
SMG5-201ENST00000361813 ENHOQ6UWT2 76 aa13.08□□□□□ -0.32
SMG5-201ENST00000361813 PRO0461Q9UI25 63 aa13.08□□□□□ -0.32
SMG5-201ENST00000361813 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
SMG5-201ENST00000361813 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
SMG5-201ENST00000361813 CITED2Q99967 270 aaPredicted RBP13.07□□□□□ -0.32
SMG5-201ENST00000361813 IBA57-AS1B1ANH7 110 aa13.06□□□□□ -0.32
SMG5-201ENST00000361813 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
SMG5-201ENST00000361813 NREPQ16612 68 aa13.06□□□□□ -0.32
SMG5-201ENST00000361813 FAM240AA0A1B0GVK7 77 aa13.06□□□□□ -0.32
SMG5-201ENST00000361813 USP17L23D6RBM5 183 aa13.06□□□□□ -0.32
SMG5-201ENST00000361813 WFDC11Q8NEX6 87 aa13.05□□□□□ -0.32
SMG5-201ENST00000361813 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
SMG5-201ENST00000361813 IGKV2D-24A0A075B6R9 120 aa13.05□□□□□ -0.32
SMG5-201ENST00000361813 COX7CP15954 63 aa13.05□□□□□ -0.32
SMG5-201ENST00000361813 CXCL5P42830 114 aa13.05□□□□□ -0.32
SMG5-201ENST00000361813 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
SMG5-201ENST00000361813 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 MTORP42345 2549 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 POLQO75417 2590 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 LINC01546A6NGU7 62 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 SMIM11BQ8TCY0 68 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 LINC00269Q8N2A0 174 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 PRO0255Q9UI72 69 aa13.04□□□□□ -0.32
SMG5-201ENST00000361813 CHD9Q3L8U1 2897 aa13.03□□□□□ -0.32
SMG5-201ENST00000361813 SERP2Q8N6R1 65 aa13.03□□□□□ -0.32
SMG5-201ENST00000361813 DIRC1Q969H9 104 aa13.03□□□□□ -0.32
SMG5-201ENST00000361813 PRB2P02812 416 aaPredicted RBP13.03□□□□□ -0.32
SMG5-201ENST00000361813 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
SMG5-201ENST00000361813 ZFYVE26Q68DK2 2539 aa13.02□□□□□ -0.33
SMG5-201ENST00000361813 DEFB135Q30KP9 77 aa13.02□□□□□ -0.33
SMG5-201ENST00000361813 C18orf65Q6ZTR6 163 aa13.02□□□□□ -0.33
SMG5-201ENST00000361813 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
SMG5-201ENST00000361813 FUSP35637 526 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMG5-201ENST00000361813 C6orf99Q4VX62 202 aa13.01□□□□□ -0.33
SMG5-201ENST00000361813 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
SMG5-201ENST00000361813 FAM222AQ5U5X8 452 aa13.01□□□□□ -0.33
SMG5-201ENST00000361813 LOC100131303A0A0U1RQF7 123 aa13.01□□□□□ -0.33
SMG5-201ENST00000361813 SCXQ7RTU7 201 aa13□□□□□ -0.33
SMG5-201ENST00000361813 KIF25-AS1Q9Y6Z4 181 aa13□□□□□ -0.33
SMG5-201ENST00000361813 DOPEY1Q5JWR5 2465 aa13□□□□□ -0.33
SMG5-201ENST00000361813 LRRK2Q5S007 2527 aa13□□□□□ -0.33
SMG5-201ENST00000361813 A0A1W2PPR1 153 aa13□□□□□ -0.33
SMG5-201ENST00000361813 PSCAO43653 123 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms