RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 LINC01620Q4KN68 170 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 ZNF843Q8N446 348 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 UBE2E2Q96LR5 201 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 ZNF702PQ9H963 129 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 XCL2Q9UBD3 114 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 H3BMM0 161 aa7.66□□□□□ -1.18
SMC3-201ENST00000361804 LINC01587Q99440 93 aa7.66□□□□□ -1.18
SMC3-201ENST00000361804 CSMD3Q7Z407 3707 aa7.66□□□□□ -1.18
SMC3-201ENST00000361804 TRGV11A0A075B6L2 103 aa7.66□□□□□ -1.18
SMC3-201ENST00000361804 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
SMC3-201ENST00000361804 MRPS36P82909 103 aaKnown RBP7.66□□□□□ -1.18
SMC3-201ENST00000361804 LINC00694P0DN24 101 aa7.65□□□□□ -1.18
SMC3-201ENST00000361804 A0A0B4J2C4 111 aa7.65□□□□□ -1.18
SMC3-201ENST00000361804 ODF3Q96PU9 254 aa7.65□□□□□ -1.18
SMC3-201ENST00000361804 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.19
SMC3-201ENST00000361804 A0A1W2PRX2 142 aa7.65□□□□□ -1.19
SMC3-201ENST00000361804 VSIG2Q96IQ7 327 aa7.65□□□□□ -1.19
SMC3-201ENST00000361804 ICOSQ9Y6W8 199 aa7.64□□□□□ -1.19
SMC3-201ENST00000361804 VPREB3Q9UKI3 123 aa7.64□□□□□ -1.19
SMC3-201ENST00000361804 LINC01356Q8N9X3 169 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 TRAV13-1A0A0B4J241 112 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 H7C423 109 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 PLA2G2AP14555 144 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
SMC3-201ENST00000361804 ATXN8Q156A1 80 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 MAP6D1Q9H9H5 199 aa7.63□□□□□ -1.19
SMC3-201ENST00000361804 C2orf82Q6UX34 121 aa7.62□□□□□ -1.19
SMC3-201ENST00000361804 C11orf72Q8NBR9 251 aa7.62□□□□□ -1.19
SMC3-201ENST00000361804 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
SMC3-201ENST00000361804 ANAPC13Q9BS18 74 aa7.62□□□□□ -1.19
SMC3-201ENST00000361804 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.62□□□□□ -1.19
SMC3-201ENST00000361804 TMEM89A2RUT3 159 aa7.61□□□□□ -1.19
SMC3-201ENST00000361804 MIAQ16674 131 aa7.61□□□□□ -1.19
SMC3-201ENST00000361804 Q8N2B8 174 aa7.61□□□□□ -1.19
SMC3-201ENST00000361804 PYGO1Q9Y3Y4 419 aa7.61□□□□□ -1.19
SMC3-201ENST00000361804 Q9H8V8 135 aa7.61□□□□□ -1.19
SMC3-201ENST00000361804 SS18L2Q9UHA2 77 aa7.61□□□□□ -1.19
SMC3-201ENST00000361804 TRGV1A0A0A0MS02 117 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 NHLRC4P0CG21 123 aaPredicted RBP7.6□□□□□ -1.19
SMC3-201ENST00000361804 DGAT2L7PQ6IED9 249 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 WFDC10AQ9H1F0 79 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 PKD1L1Q8TDX9 2849 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 IGKV3OR2-268A0A0C4DH90 116 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 HIST2H2BCQ6DN03 193 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 ZFAND6Q6FIF0 208 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 TEX29Q8N6K0 151 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 DNAH1Q9P2D7 4330 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 TINCRA0A1B0GVN0 87 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 KRTAP1-1Q07627 177 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 ZNF415Q09FC8 603 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 SOSTDC1Q6X4U4 206 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 DYNLRB2Q8TF09 96 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 CITED1Q99966 193 aa7.6□□□□□ -1.19
SMC3-201ENST00000361804 CITED2Q99967 270 aaPredicted RBP7.6□□□□□ -1.19
SMC3-201ENST00000361804 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
SMC3-201ENST00000361804 Q6YL49 198 aa7.59□□□□□ -1.19
SMC3-201ENST00000361804 Q6ZTI0 123 aa7.59□□□□□ -1.19
SMC3-201ENST00000361804 UBE2WQ96B02 151 aa7.59□□□□□ -1.19
SMC3-201ENST00000361804 IGHV4-31P0DP07 118 aa7.59□□□□□ -1.19
SMC3-201ENST00000361804 C15orf53Q8NAA6 179 aa7.59□□□□□ -1.19
SMC3-201ENST00000361804 TRAV8-4A0A0B4J246 113 aa7.59□□□□□ -1.2
SMC3-201ENST00000361804 B5MCH6 92 aa7.59□□□□□ -1.2
SMC3-201ENST00000361804 LOC100131303A0A0U1RQF7 123 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 C3orf56Q8N813 242 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 GAGE12JA6NER3 117 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 SNCGO76070 127 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 GAGE4Q13068 117 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 GAGE5Q13069 117 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 PIK3CD-AS1Q5SR53 167 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 ODF3L2Q3SX64 289 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
SMC3-201ENST00000361804 CCDC179H3BU77 68 aa7.57□□□□□ -1.2
SMC3-201ENST00000361804 GAGE2BQ13066 116 aa7.57□□□□□ -1.2
SMC3-201ENST00000361804 GAGE2EQ4V326 116 aa7.57□□□□□ -1.2
SMC3-201ENST00000361804 C1orf158Q8N1D5 194 aa7.57□□□□□ -1.2
SMC3-201ENST00000361804 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
SMC3-201ENST00000361804 GAGE2DQ9UEU5 116 aa7.57□□□□□ -1.2
SMC3-201ENST00000361804 DEFB114Q30KQ6 69 aa7.56□□□□□ -1.2
SMC3-201ENST00000361804 LINC00308Q8TCZ7 52 aa7.56□□□□□ -1.2
SMC3-201ENST00000361804 TMEM262E9PQX1 116 aa7.56□□□□□ -1.2
SMC3-201ENST00000361804 RNF152Q8N8N0 203 aa7.56□□□□□ -1.2
SMC3-201ENST00000361804 Q96MF0 132 aa7.56□□□□□ -1.2
SMC3-201ENST00000361804 FBN1P35555 2871 aaKnown RBP7.56□□□□□ -1.2
SMC3-201ENST00000361804 INSP01308 110 aa7.55□□□□□ -1.2
SMC3-201ENST00000361804 LST1O00453 97 aa7.55□□□□□ -1.2
SMC3-201ENST00000361804 MEIG1Q5JSS6 88 aa7.55□□□□□ -1.2
SMC3-201ENST00000361804 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
SMC3-201ENST00000361804 SMIM1B2RUZ4 78 aa7.54□□□□□ -1.2
SMC3-201ENST00000361804 NDUFV3P56181 108 aaKnown RBP7.54□□□□□ -1.2
SMC3-201ENST00000361804 NOP10Q9NPE3 64 aaKnown RBP7.54□□□□□ -1.2
SMC3-201ENST00000361804 PRIMA1Q86XR5 153 aa7.54□□□□□ -1.2
SMC3-201ENST00000361804 RS1O15537 224 aa7.54□□□□□ -1.2
SMC3-201ENST00000361804 COX6CP09669 75 aa7.54□□□□□ -1.2
SMC3-201ENST00000361804 NDUFA1O15239 70 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms