RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CEMP1Q6PRD7 247 aaPredicted RBP10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 RITA1Q96K30 269 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 C9orf85Q96MD7 179 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 COX17Q14061 63 aa10.04□□□□□ -0.8
SRGAP3-201ENST00000360413 WT1P19544 449 aaPredicted RBP10.04□□□□□ -0.8
SRGAP3-201ENST00000360413 FAM19A5Q7Z5A7 132 aaPredicted RBP10.04□□□□□ -0.8
SRGAP3-201ENST00000360413 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
SRGAP3-201ENST00000360413 MIFP14174 115 aa10.04□□□□□ -0.8
SRGAP3-201ENST00000360413 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 CTSGP08311 255 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 UBE2D2P62837 147 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 C3orf84H3BNL1 204 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 ESM1Q9NQ30 184 aa10.03□□□□□ -0.8
SRGAP3-201ENST00000360413 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
SRGAP3-201ENST00000360413 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.81
SRGAP3-201ENST00000360413 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
SRGAP3-201ENST00000360413 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
SRGAP3-201ENST00000360413 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
SRGAP3-201ENST00000360413 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 CCKP06307 115 aa10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 FAM215AQ9Y5M1 114 aa10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 LINC00308Q8TCZ7 52 aa10.01□□□□□ -0.81
SRGAP3-201ENST00000360413 PIP4P1Q86T03 277 aa10□□□□□ -0.81
SRGAP3-201ENST00000360413 Q6Q795 121 aa10□□□□□ -0.81
SRGAP3-201ENST00000360413 C1orf158Q8N1D5 194 aa10□□□□□ -0.81
SRGAP3-201ENST00000360413 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
SRGAP3-201ENST00000360413 A0A0J9YX75 114 aa9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 LINC00269Q8N2A0 174 aa9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 COL5A1P20908 1838 aaPredicted RBP9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 IGKV1D-37A0A075B6S9 117 aa9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 C2orf91Q6ZV80 131 aa9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
SRGAP3-201ENST00000360413 PIEZO2Q9H5I5 2752 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 ZNF462Q96JM2 2506 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 DEFB131BA0A096LNP1 70 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 JMJD1CQ15652 2540 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 SHISA2Q6UWI4 295 aa9.98□□□□□ -0.81
SRGAP3-201ENST00000360413 C11orf53Q8IXP5 236 aa9.97□□□□□ -0.81
SRGAP3-201ENST00000360413 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
SRGAP3-201ENST00000360413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.96□□□□□ -0.81
SRGAP3-201ENST00000360413 ANKRD17O75179 2603 aaKnown RBP9.96□□□□□ -0.81
SRGAP3-201ENST00000360413 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
SRGAP3-201ENST00000360413 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
SRGAP3-201ENST00000360413 LST1O00453 97 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 DEFB1P60022 68 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 Q6ZVQ6 151 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 LINC00467Q9BRT7 94 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 CTSZQ9UBR2 303 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 A0A096LNI7 61 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 C22orf34Q6ZV56 151 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 TRAV7A0A075B6U4 112 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 PKD1L2Q7Z442 2459 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 IGLV2-14P01704 120 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 MTORP42345 2549 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 IGFL2Q6UWQ7 119 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 MAP6D1Q9H9H5 199 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 IGLV2-8P01709 118 aa9.95□□□□□ -0.82
SRGAP3-201ENST00000360413 PSPHP1O15172 72 aa9.94□□□□□ -0.82
SRGAP3-201ENST00000360413 EBI3Q14213 229 aa9.94□□□□□ -0.82
SRGAP3-201ENST00000360413 WFDC13Q8IUB5 93 aa9.94□□□□□ -0.82
SRGAP3-201ENST00000360413 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
SRGAP3-201ENST00000360413 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
SRGAP3-201ENST00000360413 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
SRGAP3-201ENST00000360413 Q6JHZ5 121 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 WFDC10AQ9H1F0 79 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 YPEL4Q96NS1 127 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 IGHV4-30-4P0DP06 118 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 IGHV4-31P0DP07 118 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 ZNF80P51504 273 aaPredicted RBP9.93□□□□□ -0.82
SRGAP3-201ENST00000360413 E7EUB6 86 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 FBXL19-AS1Q494R0 122 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 SPRNQ5BIV9 151 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 DNAJC9-AS1A6NH13 148 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 C11orf1Q9H5F2 150 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 LY6G6EA0A0G2JKS1 128 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 M0R378 163 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 DCANP1Q8TF63 244 aa9.92□□□□□ -0.82
SRGAP3-201ENST00000360413 VPREB1P12018 145 aa9.91□□□□□ -0.82
SRGAP3-201ENST00000360413 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
SRGAP3-201ENST00000360413 C6orf99Q4VX62 202 aa9.91□□□□□ -0.82
SRGAP3-201ENST00000360413 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
SRGAP3-201ENST00000360413 Q8N976 141 aa9.91□□□□□ -0.82
SRGAP3-201ENST00000360413 FSHBP01225 129 aa9.91□□□□□ -0.82
SRGAP3-201ENST00000360413 RPL28P46779 137 aaKnown RBP9.9□□□□□ -0.82
SRGAP3-201ENST00000360413 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.82
SRGAP3-201ENST00000360413 U3KQK5 164 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms