RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
CUX1-203ENST00000360264 HELZ2Q9BYK8 2649 aaKnown RBP7.33□□□□□ -1.24
CUX1-203ENST00000360264 IGKV2D-26A0A0A0MRZ7 120 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 MRPL55Q7Z7F7 128 aaKnown RBP7.33□□□□□ -1.24
CUX1-203ENST00000360264 ODF3BA8MYP8 253 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 DEFB114Q30KQ6 69 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 HIGD2AQ9BW72 106 aa7.32□□□□□ -1.24
CUX1-203ENST00000360264 UNQ9165/PRO28630Q6UXU0 137 aa7.32□□□□□ -1.24
CUX1-203ENST00000360264 G3V4G9 280 aa7.32□□□□□ -1.24
CUX1-203ENST00000360264 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
CUX1-203ENST00000360264 SPATA12Q7Z6I5 190 aa7.32□□□□□ -1.24
CUX1-203ENST00000360264 WT1P19544 449 aaPredicted RBP7.32□□□□□ -1.24
CUX1-203ENST00000360264 PLA2G5P39877 138 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 CD164L2Q6UWJ8 174 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 COX17Q14061 63 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 CHCHD10Q8WYQ3 142 aaPredicted RBP7.31□□□□□ -1.24
CUX1-203ENST00000360264 P0DMU3 169 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 FAM231AP0DMU4 169 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 FAM231CP0DMU5 169 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
CUX1-203ENST00000360264 NEXN-AS1Q8NBZ9 246 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
CUX1-203ENST00000360264 WFDC2Q14508 124 aa7.3□□□□□ -1.24
CUX1-203ENST00000360264 Q8NA96 180 aa7.3□□□□□ -1.24
CUX1-203ENST00000360264 IGKV2-24A0A0C4DH68 120 aa7.3□□□□□ -1.24
CUX1-203ENST00000360264 TRBV6-4A0A1B0GX49 114 aa7.3□□□□□ -1.24
CUX1-203ENST00000360264 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
CUX1-203ENST00000360264 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 NRGNQ92686 78 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 A0A1B0GXF2 115 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 COL5A1P20908 1838 aaPredicted RBP7.29□□□□□ -1.24
CUX1-203ENST00000360264 TCL1BO95988 128 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 TRBV30A0A0K0K1B3 111 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 UBE2D3P61077 147 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 TIMM17BO60830 172 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 IGHV4-31P0DP07 118 aa7.29□□□□□ -1.24
CUX1-203ENST00000360264 LRCOL1A6NCL2 159 aa7.28□□□□□ -1.24
CUX1-203ENST00000360264 LMO4P61968 165 aa7.28□□□□□ -1.24
CUX1-203ENST00000360264 TRBV6-8A0A0A6YYG3 113 aa7.28□□□□□ -1.24
CUX1-203ENST00000360264 Q6ZTI0 123 aa7.28□□□□□ -1.24
CUX1-203ENST00000360264 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
CUX1-203ENST00000360264 Q8N9L7 120 aa7.28□□□□□ -1.24
CUX1-203ENST00000360264 PRAC2D3DTV9 90 aa7.27□□□□□ -1.25
CUX1-203ENST00000360264 FAM240AA0A1B0GVK7 77 aa7.27□□□□□ -1.25
CUX1-203ENST00000360264 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
CUX1-203ENST00000360264 PIK3CD-AS1Q5SR53 167 aa7.27□□□□□ -1.25
CUX1-203ENST00000360264 LOC107984640A0A0U1RRK4 108 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 SPRNQ5BIV9 151 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 M0QY20 66 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 CCKP06307 115 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 LYPD6Q86Y78 171 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 LELP1Q5T871 98 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 DNAH12Q6ZR08 3092 aa7.26□□□□□ -1.25
CUX1-203ENST00000360264 TRBV27A0A0K0K1C4 114 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 LINC00467Q9BRT7 94 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 IGKV1D-37A0A075B6S9 117 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 P0C879 139 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 EBI3Q14213 229 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 KPRPQ5T749 579 aaPredicted RBP7.25□□□□□ -1.25
CUX1-203ENST00000360264 M0R378 163 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 Q8N976 141 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 ZNF22P17026 224 aaPredicted RBP7.25□□□□□ -1.25
CUX1-203ENST00000360264 IGLV2-14P01704 120 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 ENHOQ6UWT2 76 aa7.25□□□□□ -1.25
CUX1-203ENST00000360264 UQCRQO14949 82 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 NUPR2A6NF83 97 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 K7EQG2 157 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 DEFB1P60022 68 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 PYGO1Q9Y3Y4 419 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 NOTCH1P46531 2555 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 C9orf85Q96MD7 179 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 E7EUB6 86 aa7.24□□□□□ -1.25
CUX1-203ENST00000360264 FLNAP21333 2647 aaKnown RBP7.23□□□□□ -1.25
CUX1-203ENST00000360264 MRPS36P82909 103 aaKnown RBP7.23□□□□□ -1.25
CUX1-203ENST00000360264 MRGPRG-AS1Q2M3A8 158 aa7.23□□□□□ -1.25
CUX1-203ENST00000360264 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
CUX1-203ENST00000360264 C1orf158Q8N1D5 194 aa7.23□□□□□ -1.25
CUX1-203ENST00000360264 A0A0C4DFX4 3053 aa7.23□□□□□ -1.25
CUX1-203ENST00000360264 RNF185Q96GF1 192 aa7.23□□□□□ -1.25
CUX1-203ENST00000360264 TDRG1Q3Y452 100 aa7.23□□□□□ -1.25
CUX1-203ENST00000360264 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.22□□□□□ -1.25
CUX1-203ENST00000360264 IGLC6P0CF74 106 aa7.22□□□□□ -1.25
CUX1-203ENST00000360264 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
CUX1-203ENST00000360264 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
CUX1-203ENST00000360264 INAFM1C9JVW0 142 aa7.22□□□□□ -1.25
CUX1-203ENST00000360264 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
CUX1-203ENST00000360264 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
CUX1-203ENST00000360264 FAM19A3Q7Z5A8 133 aa7.21□□□□□ -1.25
CUX1-203ENST00000360264 C6orf99Q4VX62 202 aa7.21□□□□□ -1.25
CUX1-203ENST00000360264 U3KQK5 164 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms