RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 Q8N976 141 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 UBE2D4Q9Y2X8 147 aa8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 CSDC2Q9Y534 153 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-201ENST00000359683 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 SERF1AO75920 110 aa8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 BTF3P20290 206 aaKnown RBP8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 SMAGPQ0VAQ4 97 aa8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 TOMM6Q96B49 74 aa8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.07
NIF3L1-201ENST00000359683 TRAV9-2A0A087WT02 112 aa8.39□□□□□ -1.07
NIF3L1-201ENST00000359683 A0A096LNJ9 63 aa8.39□□□□□ -1.07
NIF3L1-201ENST00000359683 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
NIF3L1-201ENST00000359683 NUPR1O60356 82 aa8.39□□□□□ -1.07
NIF3L1-201ENST00000359683 ODF1Q14990 250 aa8.39□□□□□ -1.07
NIF3L1-201ENST00000359683 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
NIF3L1-201ENST00000359683 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
NIF3L1-201ENST00000359683 HSBP1O75506 76 aa8.38□□□□□ -1.07
NIF3L1-201ENST00000359683 C10orf126Q8N4M7 172 aa8.38□□□□□ -1.07
NIF3L1-201ENST00000359683 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
NIF3L1-201ENST00000359683 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
NIF3L1-201ENST00000359683 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 IBA57-AS1B1ANH7 110 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 HBDP02042 147 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 NDUFA6P56556 154 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 TTC32Q5I0X7 151 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 Q6ZR54 194 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
NIF3L1-201ENST00000359683 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 NPSP0C0P6 89 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 ERASQ7Z444 233 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 TIMM17AQ99595 171 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
NIF3L1-201ENST00000359683 ENHOQ6UWT2 76 aa8.35□□□□□ -1.07
NIF3L1-201ENST00000359683 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
NIF3L1-201ENST00000359683 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
NIF3L1-201ENST00000359683 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-201ENST00000359683 IGLV4-3A0A075B6K6 122 aa8.34□□□□□ -1.07
NIF3L1-201ENST00000359683 M0R2N4 97 aa8.34□□□□□ -1.07
NIF3L1-201ENST00000359683 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
NIF3L1-201ENST00000359683 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
NIF3L1-201ENST00000359683 Q6ZUT4 128 aa8.33□□□□□ -1.08
NIF3L1-201ENST00000359683 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
NIF3L1-201ENST00000359683 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
NIF3L1-201ENST00000359683 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 REG3AQ06141 175 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 AMELXQ99217 191 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 ATP5LO75964 103 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 MIAQ16674 131 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 PAPPA-AS1Q5QFB9 102 aa8.32□□□□□ -1.08
NIF3L1-201ENST00000359683 KRTAP9-6A0A140TA67 174 aa8.31□□□□□ -1.08
NIF3L1-201ENST00000359683 CRPP02741 224 aa8.31□□□□□ -1.08
NIF3L1-201ENST00000359683 CLPSL2Q6UWE3 100 aa8.31□□□□□ -1.08
NIF3L1-201ENST00000359683 VCX2Q9H322 139 aa8.31□□□□□ -1.08
NIF3L1-201ENST00000359683 FRAS1Q86XX4 4008 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 TRAV8-4A0A0B4J246 113 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 S100A6P06703 90 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 Q6ZN92 141 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 TEX43Q6ZNM6 134 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
NIF3L1-201ENST00000359683 CCL25O15444 150 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 BAALCQ8WXS3 180 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 IFI27L1Q96BM0 104 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 PACRGQ96M98 296 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 Q9HAA7 133 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 IGKV3OR2-268A0A0C4DH90 116 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 PMVKQ15126 192 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 C6orf223Q8N319 242 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
NIF3L1-201ENST00000359683 TRAV13-1A0A0B4J241 112 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 C5orf52A6NGY3 159 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 IFITM10A6NMD0 228 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 FABP4P15090 132 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 C1orf134Q5TEV5 83 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 HIST3H2BBQ8N257 126 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 RMI2Q96E14 147 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms