RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 NPC2P61916 151 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 CEMP1Q6PRD7 247 aaPredicted RBP10.98□□□□□ -0.65
UBAP1-202ENST00000359544 BPESC1Q9GZL8 116 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
UBAP1-202ENST00000359544 HERVK_113P63121 156 aa10.97□□□□□ -0.65
UBAP1-202ENST00000359544 C10orf105Q8TEF2 133 aa10.97□□□□□ -0.65
UBAP1-202ENST00000359544 LINC00527Q9UJ94 153 aa10.97□□□□□ -0.65
UBAP1-202ENST00000359544 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
UBAP1-202ENST00000359544 TINCRA0A1B0GVN0 87 aa10.97□□□□□ -0.65
UBAP1-202ENST00000359544 CUBNO60494 3623 aa10.96□□□□□ -0.65
UBAP1-202ENST00000359544 IGKV3-7A0A075B6H7 116 aa10.96□□□□□ -0.66
UBAP1-202ENST00000359544 IGHV4-61A0A0C4DH41 118 aa10.96□□□□□ -0.66
UBAP1-202ENST00000359544 C19orf54Q5BKX5 351 aa10.96□□□□□ -0.66
UBAP1-202ENST00000359544 COX7A2LO14548 114 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 LY6G6DO95868 133 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
UBAP1-202ENST00000359544 SAA4P35542 130 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 SMCR5Q8TEV8 140 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 ANK3Q12955 4377 aaKnown RBP10.95□□□□□ -0.66
UBAP1-202ENST00000359544 TRBV12-3P01733 135 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
UBAP1-202ENST00000359544 CR1P17927 2039 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 COX7CP15954 63 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 RHPN1-AS1Q9BWJ2 59 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 A0A096LNT2 108 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 CIRBPQ14011 172 aaKnown RBP10.94□□□□□ -0.66
UBAP1-202ENST00000359544 C5orf38Q86SI9 138 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
UBAP1-202ENST00000359544 COPS9Q8WXC6 57 aa10.93□□□□□ -0.66
UBAP1-202ENST00000359544 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
UBAP1-202ENST00000359544 PIMREGQ9BSJ6 248 aa10.93□□□□□ -0.66
UBAP1-202ENST00000359544 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
UBAP1-202ENST00000359544 KRTAP1-1Q07627 177 aa10.92□□□□□ -0.66
UBAP1-202ENST00000359544 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
UBAP1-202ENST00000359544 CRYGAP11844 174 aa10.92□□□□□ -0.66
UBAP1-202ENST00000359544 DAND5Q8N907 189 aa10.92□□□□□ -0.66
UBAP1-202ENST00000359544 FAM104AQ969W3 186 aa10.92□□□□□ -0.66
UBAP1-202ENST00000359544 CITED2Q99967 270 aaPredicted RBP10.92□□□□□ -0.66
UBAP1-202ENST00000359544 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
UBAP1-202ENST00000359544 NDUFA1O15239 70 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 TRACP01848 142 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
UBAP1-202ENST00000359544 FN1P02751 2386 aaKnown RBP10.91□□□□□ -0.66
UBAP1-202ENST00000359544 IGHV1OR15-1A0A075B7D0 117 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 LOC107984640A0A0U1RRK4 108 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 ATOX1O00244 68 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 INAFM2P0DMQ5 153 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 DAZ2Q13117 558 aaKnown RBP10.91□□□□□ -0.66
UBAP1-202ENST00000359544 GAGE2AQ6NT46 116 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 DAZ4Q86SG3 579 aaKnown RBP10.91□□□□□ -0.66
UBAP1-202ENST00000359544 TMEM219Q86XT9 240 aa10.91□□□□□ -0.66
UBAP1-202ENST00000359544 DAZ1Q9NQZ3 744 aaKnown RBP10.91□□□□□ -0.66
UBAP1-202ENST00000359544 DAZ3Q9NR90 486 aaKnown RBP10.91□□□□□ -0.66
UBAP1-202ENST00000359544 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
UBAP1-202ENST00000359544 H3BUA1 57 aa10.9□□□□□ -0.66
UBAP1-202ENST00000359544 A8MZ25 164 aa10.89□□□□□ -0.67
UBAP1-202ENST00000359544 DSCR9P59020 149 aa10.89□□□□□ -0.67
UBAP1-202ENST00000359544 FAM222AQ5U5X8 452 aa10.89□□□□□ -0.67
UBAP1-202ENST00000359544 FAM19A5Q7Z5A7 132 aaPredicted RBP10.89□□□□□ -0.67
UBAP1-202ENST00000359544 HIVEP2P31629 2446 aa10.89□□□□□ -0.67
UBAP1-202ENST00000359544 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
UBAP1-202ENST00000359544 OR13C6PQ8NH95 151 aa10.88□□□□□ -0.67
UBAP1-202ENST00000359544 LINC00308Q8TCZ7 52 aa10.88□□□□□ -0.67
UBAP1-202ENST00000359544 BAALC-AS2P0C853 105 aa10.88□□□□□ -0.67
UBAP1-202ENST00000359544 IGHV4-31P0DP07 118 aa10.88□□□□□ -0.67
UBAP1-202ENST00000359544 RNASE13Q5GAN3 156 aaKnown RBP10.88□□□□□ -0.67
UBAP1-202ENST00000359544 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
UBAP1-202ENST00000359544 HIST1H4AP62805 103 aaKnown RBP10.87□□□□□ -0.67
UBAP1-202ENST00000359544 C2orf48Q96LS8 159 aa10.87□□□□□ -0.67
UBAP1-202ENST00000359544 KLK5Q9Y337 293 aaPredicted RBP10.87□□□□□ -0.67
UBAP1-202ENST00000359544 UBE2D4Q9Y2X8 147 aa10.87□□□□□ -0.67
UBAP1-202ENST00000359544 JMJD1CQ15652 2540 aa10.86□□□□□ -0.67
UBAP1-202ENST00000359544 TRAV12-2A0A075B6T6 113 aa10.86□□□□□ -0.67
UBAP1-202ENST00000359544 BEAN1Q3B7T3 259 aa10.86□□□□□ -0.67
UBAP1-202ENST00000359544 TIRAPP58753 221 aa10.86□□□□□ -0.67
UBAP1-202ENST00000359544 K7EMT4 169 aa10.85□□□□□ -0.67
UBAP1-202ENST00000359544 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
UBAP1-202ENST00000359544 LMO4P61968 165 aa10.85□□□□□ -0.67
UBAP1-202ENST00000359544 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
UBAP1-202ENST00000359544 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
UBAP1-202ENST00000359544 PF4V1P10720 104 aa10.83□□□□□ -0.68
UBAP1-202ENST00000359544 SNRPD3P62318 126 aaKnown RBP10.83□□□□□ -0.68
UBAP1-202ENST00000359544 CDKN2A-AS1Q9UH64 79 aa10.83□□□□□ -0.68
UBAP1-202ENST00000359544 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
UBAP1-202ENST00000359544 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
UBAP1-202ENST00000359544 ZNF415Q09FC8 603 aa10.82□□□□□ -0.68
UBAP1-202ENST00000359544 Q9H8V8 135 aa10.82□□□□□ -0.68
UBAP1-202ENST00000359544 TMEM258P61165 79 aa10.82□□□□□ -0.68
UBAP1-202ENST00000359544 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
UBAP1-202ENST00000359544 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
UBAP1-202ENST00000359544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.682e-7■■■■■ 46.8
UBAP1-202ENST00000359544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.81□□□□□ -0.68
UBAP1-202ENST00000359544 hADV29S1A0JD25 119 aa10.81□□□□□ -0.68
UBAP1-202ENST00000359544 IGKV2-29A2NJV5 120 aaPredicted RBP10.81□□□□□ -0.68
UBAP1-202ENST00000359544 WIPF1O43516 503 aa10.81□□□□□ -0.68
UBAP1-202ENST00000359544 C22orf24Q9Y442 160 aa10.81□□□□□ -0.68
UBAP1-202ENST00000359544 IGHV3-73A0A0B4J1V6 119 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms