RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CCDC168Q8NDH2 2452 aa6.2□□□□□ -1.42
RFX3-202ENST00000358730 DNAJC9-AS1A6NH13 148 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 KRTAP1-3Q8IUG1 177 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 NF1P21359 2839 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 ZFAND6Q6FIF0 208 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 C1orf158Q8N1D5 194 aa6.19□□□□□ -1.42
RFX3-202ENST00000358730 SETD2Q9BYW2 2564 aaPredicted RBP6.19□□□□□ -1.42
RFX3-202ENST00000358730 TRIAP1O43715 76 aa6.18□□□□□ -1.42
RFX3-202ENST00000358730 FLNAP21333 2647 aaKnown RBP6.18□□□□□ -1.42
RFX3-202ENST00000358730 ATXN8Q156A1 80 aa6.18□□□□□ -1.42
RFX3-202ENST00000358730 TMEM86BQ8N661 226 aa6.18□□□□□ -1.42
RFX3-202ENST00000358730 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
RFX3-202ENST00000358730 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
RFX3-202ENST00000358730 CCL24O00175 119 aa6.18□□□□□ -1.42
RFX3-202ENST00000358730 JMJD1CQ15652 2540 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 TRBV30A0A0K0K1B3 111 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.17□□□□□ -1.42
RFX3-202ENST00000358730 DAND5Q8N907 189 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 IL17DQ8TAD2 202 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 IGLV5-45A0A087WSX0 123 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 K7EQD1 137 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 LINC00694P0DN24 101 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 TIRAPP58753 221 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 RPL36AP83881 106 aaKnown RBP6.17□□□□□ -1.42
RFX3-202ENST00000358730 LINC01620Q4KN68 170 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 Q6ZTI0 123 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
RFX3-202ENST00000358730 ICOSQ9Y6W8 199 aa6.17□□□□□ -1.42
RFX3-202ENST00000358730 COX6A2Q02221 97 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 WFDC11Q8NEX6 87 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 TMEM101Q96IK0 257 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 YAE1D1Q9NRH1 226 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 C2CD3Q4AC94 2353 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 NDUFA1O15239 70 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 XGP55808 180 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 HERVK_113P63121 156 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 ESM1Q9NQ30 184 aa6.16□□□□□ -1.42
RFX3-202ENST00000358730 M0QXV9 152 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 TIMM17BO60830 172 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 NDUFA7O95182 113 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 TRAV13-1A0A0B4J241 112 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 LINC00242Q5T6M2 205 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 TEX29Q8N6K0 151 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
RFX3-202ENST00000358730 CITED2Q99967 270 aaPredicted RBP6.15□□□□□ -1.42
RFX3-202ENST00000358730 Q9H8V8 135 aa6.15□□□□□ -1.42
RFX3-202ENST00000358730 SETXQ7Z333 2677 aaKnown RBP6.15□□□□□ -1.43
RFX3-202ENST00000358730 TRAV4A0A0B4J268 109 aa6.15□□□□□ -1.43
RFX3-202ENST00000358730 GAGE12JA6NER3 117 aa6.15□□□□□ -1.43
RFX3-202ENST00000358730 RPL13AP40429 203 aaKnown RBP6.15□□□□□ -1.43
RFX3-202ENST00000358730 GAGE4Q13068 117 aa6.15□□□□□ -1.43
RFX3-202ENST00000358730 GAGE5Q13069 117 aa6.15□□□□□ -1.43
RFX3-202ENST00000358730 NOP10Q9NPE3 64 aaKnown RBP6.15□□□□□ -1.43
RFX3-202ENST00000358730 NIPBLQ6KC79 2804 aaeCLIP6.14□□□□□ -1.43
RFX3-202ENST00000358730 A0A1B0GV72 72 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 CIDEAO60543 219 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 COX6CP09669 75 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 IFITM1P13164 125 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 DAZ2Q13117 558 aaKnown RBP6.14□□□□□ -1.43
RFX3-202ENST00000358730 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
RFX3-202ENST00000358730 NTM-AS1Q6ZSK4 140 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 DAZ4Q86SG3 579 aaKnown RBP6.14□□□□□ -1.43
RFX3-202ENST00000358730 ZNF625Q96I27 306 aaPredicted RBP6.14□□□□□ -1.43
RFX3-202ENST00000358730 DAZ3Q9NR90 486 aaKnown RBP6.14□□□□□ -1.43
RFX3-202ENST00000358730 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 TRBV10-2A0A0K0K1G8 114 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 WFDC10AQ9H1F0 79 aa6.14□□□□□ -1.43
RFX3-202ENST00000358730 A0A0U1RRA0 63 aa6.13□□□□□ -1.43
RFX3-202ENST00000358730 RNF183Q96D59 192 aa6.13□□□□□ -1.43
RFX3-202ENST00000358730 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
RFX3-202ENST00000358730 TMEM262E9PQX1 116 aa6.13□□□□□ -1.43
RFX3-202ENST00000358730 CLEC2BQ92478 149 aa6.13□□□□□ -1.43
RFX3-202ENST00000358730 CSDC2Q9Y534 153 aaKnown RBP6.13□□□□□ -1.43
RFX3-202ENST00000358730 MTORP42345 2549 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 TEX49A0A1B0GTD5 131 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 UBE2L6O14933 153 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 GAGE7O76087 117 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 GAGE12FP0CL80 117 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 GAGE12GP0CL81 117 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 GAGE12IP0CL82 117 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 RPL35AP18077 110 aaKnown RBP6.12□□□□□ -1.43
RFX3-202ENST00000358730 CKS1BP61024 79 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 LINC00308Q8TCZ7 52 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 C16orf74Q96GX8 76 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 ACANP16112 2415 aa6.12□□□□□ -1.43
RFX3-202ENST00000358730 GIG44P09565 113 aaPredicted RBP6.11□□□□□ -1.43
RFX3-202ENST00000358730 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
RFX3-202ENST00000358730 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms