RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
NFIX-201ENST00000358552 TRGV4A0A0C4DH28 118 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 GAGE7O76087 117 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 TSHBP01222 138 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 GAGE12FP0CL80 117 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 GAGE12GP0CL81 117 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 GAGE12IP0CL82 117 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 TTTY13Q9BZ97 58 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
NFIX-201ENST00000358552 CMYA5Q8N3K9 4069 aa9.48□□□□□ -0.89
NFIX-201ENST00000358552 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
NFIX-201ENST00000358552 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
NFIX-201ENST00000358552 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
NFIX-201ENST00000358552 NACAE9PAV3 2078 aa9.46□□□□□ -0.89
NFIX-201ENST00000358552 DEFB135Q30KP9 77 aa9.46□□□□□ -0.89
NFIX-201ENST00000358552 Q6ZSN1 163 aa9.46□□□□□ -0.89
NFIX-201ENST00000358552 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.89
NFIX-201ENST00000358552 ZNRF2Q8NHG8 242 aa9.46□□□□□ -0.89
NFIX-201ENST00000358552 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.89
NFIX-201ENST00000358552 H7C423 109 aa9.45□□□□□ -0.9
NFIX-201ENST00000358552 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
NFIX-201ENST00000358552 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
NFIX-201ENST00000358552 LGALS3P17931 250 aaKnown RBP9.45□□□□□ -0.9
NFIX-201ENST00000358552 UBE2D3P61077 147 aa9.45□□□□□ -0.9
NFIX-201ENST00000358552 UBE2D2P62837 147 aa9.45□□□□□ -0.9
NFIX-201ENST00000358552 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
NFIX-201ENST00000358552 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
NFIX-201ENST00000358552 IGLV4-69A0A075B6H9 119 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 K7ERJ3 54 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 P0DMU3 169 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 EMP1P54849 157 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 FHL2Q14192 279 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
NFIX-201ENST00000358552 MGAM2Q2M2H8 2515 aa9.43□□□□□ -0.9
NFIX-201ENST00000358552 UBE2D1P51668 147 aa9.43□□□□□ -0.9
NFIX-201ENST00000358552 RPL24P83731 157 aaKnown RBP9.43□□□□□ -0.9
NFIX-201ENST00000358552 TRBV20-1A0A075B6N2 111 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 IGHV4-28A0A0C4DH34 117 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 LEPROTO15243 131 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 DEFB130BP0DP73 79 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 DEFB130AP0DP74 79 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 FAM222AQ5U5X8 452 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 Q8NAQ8 132 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 VCX2Q9H322 139 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 CSDC2Q9Y534 153 aaKnown RBP9.42□□□□□ -0.9
NFIX-201ENST00000358552 NOTCH1P46531 2555 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
NFIX-201ENST00000358552 A0A0J9YY99 117 aa9.41□□□□□ -0.9
NFIX-201ENST00000358552 J3QQQ9 107 aa9.41□□□□□ -0.9
NFIX-201ENST00000358552 DAD1P61803 113 aa9.41□□□□□ -0.9
NFIX-201ENST00000358552 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
NFIX-201ENST00000358552 MRPS36P82909 103 aaKnown RBP9.41□□□□□ -0.9
NFIX-201ENST00000358552 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
NFIX-201ENST00000358552 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
NFIX-201ENST00000358552 ATP5G1P05496 136 aa9.4□□□□□ -0.9
NFIX-201ENST00000358552 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
NFIX-201ENST00000358552 NBEAL1Q6ZS30 2694 aa9.4□□□□□ -0.91
NFIX-201ENST00000358552 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 SCGB1A1P11684 91 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 GAGE4Q13068 117 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 GAGE5Q13069 117 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
NFIX-201ENST00000358552 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 AMELXQ99217 191 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 C11orf68Q9H3H3 251 aaKnown RBP9.39□□□□□ -0.91
NFIX-201ENST00000358552 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
NFIX-201ENST00000358552 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
NFIX-201ENST00000358552 UBE2L6O14933 153 aa9.37□□□□□ -0.91
NFIX-201ENST00000358552 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
NFIX-201ENST00000358552 C21orf62-AS1Q17RA5 79 aa9.37□□□□□ -0.91
NFIX-201ENST00000358552 KPRPQ5T749 579 aaPredicted RBP9.37□□□□□ -0.91
NFIX-201ENST00000358552 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
NFIX-201ENST00000358552 TRAV26-1A0A087WT03 109 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 H3BMG7 143 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 PAX4O43316 350 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 Q9UF83 564 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 IGHV3-38A0A0C4DH36 116 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 PRO1854Q9UHT4 67 aa9.36□□□□□ -0.91
NFIX-201ENST00000358552 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
NFIX-201ENST00000358552 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
NFIX-201ENST00000358552 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
NFIX-201ENST00000358552 H3BNG1 76 aa9.34□□□□□ -0.91
NFIX-201ENST00000358552 M0QXV9 152 aa9.34□□□□□ -0.91
NFIX-201ENST00000358552 GYPEP15421 78 aa9.34□□□□□ -0.91
NFIX-201ENST00000358552 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.92
NFIX-201ENST00000358552 TSPAN13O95857 204 aa9.34□□□□□ -0.92
NFIX-201ENST00000358552 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.92
NFIX-201ENST00000358552 WFDC2Q14508 124 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms