RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NBEAL2Q6ZNJ1 2754 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 IGKV2D-26A0A0A0MRZ7 120 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 IGKV3D-7A0A0C4DH55 119 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 G3V318 75 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 RPL39LQ96EH5 51 aaKnown RBP4.99□□□□□ -1.61
VPS13B-202ENST00000357162 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 DAZAP2Q15038 168 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-202ENST00000357162 CHCHD7Q9BUK0 85 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 XCL2Q9UBD3 114 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 KLK9Q9UKQ9 250 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 SPART-AS1P0CW21 52 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 DNAH12Q6ZR08 3092 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 KLLNB2CW77 178 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 MUC22E2RYF6 1773 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-202ENST00000357162 U3KQE9 123 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 LINC01561Q8N1V8 128 aa4.99□□□□□ -1.61
VPS13B-202ENST00000357162 PRO0255Q9UI72 69 aa4.98□□□□□ -1.61
VPS13B-202ENST00000357162 MIR7-3HGQ8N6C7 128 aa4.98□□□□□ -1.61
VPS13B-202ENST00000357162 GYPEP15421 78 aa4.98□□□□□ -1.61
VPS13B-202ENST00000357162 LINC00205P59089 165 aa4.98□□□□□ -1.61
VPS13B-202ENST00000357162 NOP10Q9NPE3 64 aaKnown RBP4.98□□□□□ -1.61
VPS13B-202ENST00000357162 C20orf197Q8N268 126 aa4.98□□□□□ -1.61
VPS13B-202ENST00000357162 A0A0U1RQV1 116 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 ZFAND2AQ8N6M9 145 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 CLEC2BQ92478 149 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 GNRH2O43555 120 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 CXCL6P80162 114 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 IGFL4Q6B9Z1 124 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 HHLA3Q9XRX5 114 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 CD164L2Q6UWJ8 174 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 A0A087WZ39 114 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 HIVEP1P15822 2718 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 RPL39P62891 51 aaKnown RBP4.97□□□□□ -1.61
VPS13B-202ENST00000357162 PLA2G2CQ5R387 149 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 GDF5OSQ5U4N7 250 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 TRBV6-4A0A1B0GX49 114 aa4.97□□□□□ -1.61
VPS13B-202ENST00000357162 NRGNQ92686 78 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 APCP25054 2843 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 COL4A3Q01955 1670 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 RPL35AP18077 110 aaKnown RBP4.96□□□□□ -1.61
VPS13B-202ENST00000357162 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 POLR2KP53803 58 aaKnown RBP4.96□□□□□ -1.61
VPS13B-202ENST00000357162 XGP55808 180 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 Q8N9W7 124 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 IL17DQ8TAD2 202 aa4.96□□□□□ -1.61
VPS13B-202ENST00000357162 MIFP14174 115 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
VPS13B-202ENST00000357162 C9orf66Q5T8R8 295 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 PIP4P1Q86T03 277 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 ODF3L1Q8IXM7 274 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 SPAG11BQ08648 103 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 TP53TG3Q9ULZ0 132 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
VPS13B-202ENST00000357162 ZNRD1Q9P1U0 126 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 PCSK5Q92824 1860 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 Q8IZM0 81 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 IGLV4-3A0A075B6K6 122 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 LYNX1G3V0Z9 82 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 LYNX1P0DP58 116 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 CFHR3Q02985 330 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 LIMD2Q9BT23 127 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 BRD3OSQ6XYD6 125 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 KALRNO60229 2985 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 TFF1P04155 84 aa4.95□□□□□ -1.62
VPS13B-202ENST00000357162 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-202ENST00000357162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-202ENST00000357162 IGKV2-29A2NJV5 120 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-202ENST00000357162 CCL18P55774 89 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 ZNF503-AS2A6NEH8 195 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 B9D2Q9BPU9 175 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 CTSZQ9UBR2 303 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 TRBV7-6A0A0J9YX20 115 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 C17orf77Q96MU5 243 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 CRYGAP11844 174 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 LINC00310P59036 64 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 C9orf85Q96MD7 179 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 ENHOQ6UWT2 76 aa4.94□□□□□ -1.62
VPS13B-202ENST00000357162 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-202ENST00000357162 WISP1O95388 367 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 CCKP06307 115 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 TNFRSF13BO14836 293 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-202ENST00000357162 CRIP3Q6Q6R5 217 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 LINC00474Q9P2X8 69 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 IGIPA6NJ69 53 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 H3BPC8 53 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
VPS13B-202ENST00000357162 TMEM105Q8N8V8 129 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 ZFAND3Q9H8U3 227 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 CDKN2A-AS1Q9UH64 79 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 NDUFS5O43920 106 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 ERC2-IT1O76042 136 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 BRWD1-AS2P59051 145 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 MRPS12O15235 138 aaKnown RBP4.92□□□□□ -1.62
VPS13B-202ENST00000357162 LINC00322Q6ZN03 302 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-202ENST00000357162 Q8N9L7 120 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 SDIM1Q6ZPB5 146 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 UBE2D4Q9Y2X8 147 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms