RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 COX7CP15954 63 aa13.7□□□□□ -0.22
PRPF39-201ENST00000355765 HIVEP3Q5T1R4 2406 aa13.7□□□□□ -0.22
PRPF39-201ENST00000355765 BEAN1Q3B7T3 259 aa13.7□□□□□ -0.22
PRPF39-201ENST00000355765 CYSTM1Q9H1C7 97 aa13.7□□□□□ -0.22
PRPF39-201ENST00000355765 C5orf38Q86SI9 138 aa13.69□□□□□ -0.22
PRPF39-201ENST00000355765 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
PRPF39-201ENST00000355765 J3KT08 172 aa13.69□□□□□ -0.22
PRPF39-201ENST00000355765 SDIM1Q6ZPB5 146 aa13.69□□□□□ -0.22
PRPF39-201ENST00000355765 PEMTQ9UBM1 199 aa13.69□□□□□ -0.22
PRPF39-201ENST00000355765 SYNJ2BPP57105 145 aa13.68□□□□□ -0.22
PRPF39-201ENST00000355765 C2orf48Q96LS8 159 aa13.68□□□□□ -0.22
PRPF39-201ENST00000355765 IGHV4-38-2P0DP08 117 aa13.68□□□□□ -0.22
PRPF39-201ENST00000355765 C10orf99Q6UWK7 81 aa13.68□□□□□ -0.22
PRPF39-201ENST00000355765 ACACBO00763 2458 aa13.67□□□□□ -0.22
PRPF39-201ENST00000355765 DGAT2L7PQ6IED9 249 aa13.67□□□□□ -0.22
PRPF39-201ENST00000355765 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
PRPF39-201ENST00000355765 H3BUA1 57 aa13.66□□□□□ -0.22
PRPF39-201ENST00000355765 K7EMT4 169 aa13.66□□□□□ -0.22
PRPF39-201ENST00000355765 K7EQG2 157 aa13.66□□□□□ -0.22
PRPF39-201ENST00000355765 TRACP01848 142 aa13.66□□□□□ -0.22
PRPF39-201ENST00000355765 SMIM9A6NGZ8 99 aa13.65□□□□□ -0.22
PRPF39-201ENST00000355765 PRIMA1Q86XR5 153 aa13.65□□□□□ -0.22
PRPF39-201ENST00000355765 IGKV3D-7A0A0C4DH55 119 aa13.65□□□□□ -0.22
PRPF39-201ENST00000355765 IGLV1-40P01703 118 aa13.65□□□□□ -0.22
PRPF39-201ENST00000355765 ATP5G1P05496 136 aa13.65□□□□□ -0.22
PRPF39-201ENST00000355765 CXCL5P42830 114 aa13.65□□□□□ -0.22
PRPF39-201ENST00000355765 IGHV3OR16-12A0A075B7B8 117 aa13.64□□□□□ -0.23
PRPF39-201ENST00000355765 LRRC75A-AS1Q8N1F1 130 aa13.64□□□□□ -0.23
PRPF39-201ENST00000355765 CSPG4Q6UVK1 2322 aa13.64□□□□□ -0.23
PRPF39-201ENST00000355765 C5orf47Q569G3 176 aa13.63□□□□□ -0.23
PRPF39-201ENST00000355765 C9orf129Q5T035 196 aaKnown RBP13.63□□□□□ -0.23
PRPF39-201ENST00000355765 IGLV5-45A0A087WSX0 123 aa13.62□□□□□ -0.23
PRPF39-201ENST00000355765 LINC00242Q5T6M2 205 aa13.62□□□□□ -0.23
PRPF39-201ENST00000355765 KIR2DL5BQ8NHK3 375 aa13.62□□□□□ -0.23
PRPF39-201ENST00000355765 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
PRPF39-201ENST00000355765 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 CRYGAP11844 174 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 MALP21145 153 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 C14orf132Q9NPU4 83 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 A0A087WVE0 104 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 IGLV5-39A0A0G2JS06 123 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 A6NDX4 124 aa13.61□□□□□ -0.23
PRPF39-201ENST00000355765 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
PRPF39-201ENST00000355765 ATOX1O00244 68 aa13.6□□□□□ -0.23
PRPF39-201ENST00000355765 CUBNO60494 3623 aa13.6□□□□□ -0.23
PRPF39-201ENST00000355765 A0A1B0GX51 115 aa13.6□□□□□ -0.23
PRPF39-201ENST00000355765 PRORYQ9H606 182 aa13.6□□□□□ -0.23
PRPF39-201ENST00000355765 CFAP46Q8IYW2 2715 aa13.6□□□□□ -0.23
PRPF39-201ENST00000355765 DNAL4O96015 105 aa13.59□□□□□ -0.23
PRPF39-201ENST00000355765 HIST1H4AP62805 103 aaKnown RBP13.59□□□□□ -0.23
PRPF39-201ENST00000355765 PIMREGQ9BSJ6 248 aa13.59□□□□□ -0.23
PRPF39-201ENST00000355765 CSMD2Q7Z408 3487 aa13.59□□□□□ -0.23
PRPF39-201ENST00000355765 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
PRPF39-201ENST00000355765 A0A087WYN8 130 aa13.57□□□□□ -0.24
PRPF39-201ENST00000355765 CFHR3Q02985 330 aa13.57□□□□□ -0.24
PRPF39-201ENST00000355765 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
PRPF39-201ENST00000355765 RPL18AQ02543 176 aaKnown RBP13.56□□□□□ -0.24
PRPF39-201ENST00000355765 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
PRPF39-201ENST00000355765 IGSF10Q6WRI0 2623 aa13.56□□□□□ -0.24
PRPF39-201ENST00000355765 DEFB131AP59861 70 aa13.55□□□□□ -0.24
PRPF39-201ENST00000355765 HIST2H2BCQ6DN03 193 aa13.55□□□□□ -0.24
PRPF39-201ENST00000355765 HIST2H2BDQ6DRA6 164 aa13.55□□□□□ -0.24
PRPF39-201ENST00000355765 COPS9Q8WXC6 57 aa13.55□□□□□ -0.24
PRPF39-201ENST00000355765 DSCR8Q96T75 97 aa13.55□□□□□ -0.24
PRPF39-201ENST00000355765 RBMY1BA6NDE4 496 aaKnown RBP13.54□□□□□ -0.24
PRPF39-201ENST00000355765 RBMY1EA6NEQ0 496 aaKnown RBP13.54□□□□□ -0.24
PRPF39-201ENST00000355765 RBMY1DP0C7P1 496 aaKnown RBP13.54□□□□□ -0.24
PRPF39-201ENST00000355765 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
PRPF39-201ENST00000355765 LINC00846Q9NV44 126 aa13.54□□□□□ -0.24
PRPF39-201ENST00000355765 IGHV4-61A0A0C4DH41 118 aa13.54□□□□□ -0.24
PRPF39-201ENST00000355765 IGHV3-53P01767 116 aa13.54□□□□□ -0.24
PRPF39-201ENST00000355765 CRPP02741 224 aa13.54□□□□□ -0.24
PRPF39-201ENST00000355765 PSMB8P28062 276 aa13.53□□□□□ -0.24
PRPF39-201ENST00000355765 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
PRPF39-201ENST00000355765 NOTCH3Q9UM47 2321 aa13.53□□□□□ -0.24
PRPF39-201ENST00000355765 OR13C6PQ8NH95 151 aa13.52□□□□□ -0.24
PRPF39-201ENST00000355765 OXTP01178 125 aa13.51□□□□□ -0.25
PRPF39-201ENST00000355765 DPH3Q96FX2 82 aa13.51□□□□□ -0.25
PRPF39-201ENST00000355765 RPL28P46779 137 aaKnown RBP13.5□□□□□ -0.25
PRPF39-201ENST00000355765 Q96MF0 132 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 NCR3O14931 201 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 GNLYP22749 145 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 MIR7-3HGQ8N6C7 128 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 CELSR2Q9HCU4 2923 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 IGKV2-28A0A075B6P5 120 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 IGKV2D-28P01615 120 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 SMIM11BQ8TCY0 68 aa13.5□□□□□ -0.25
PRPF39-201ENST00000355765 FLNCQ14315 2725 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 TRAV13-2A0A0B4J235 113 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 F5H768 121 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 SLPIP03973 132 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 RPS28P62857 69 aaKnown RBP13.49□□□□□ -0.25
PRPF39-201ENST00000355765 LINC01561Q8N1V8 128 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 SERP2Q8N6R1 65 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 TOMM7Q9P0U1 55 aa13.49□□□□□ -0.25
PRPF39-201ENST00000355765 RNF152Q8N8N0 203 aa13.48□□□□□ -0.25
PRPF39-201ENST00000355765 SND1-IT1Q9HBX3 110 aa13.48□□□□□ -0.25
PRPF39-201ENST00000355765 USP17L23D6RBM5 183 aa13.47□□□□□ -0.25
PRPF39-201ENST00000355765 UPK3BQ9BT76 320 aa13.47□□□□□ -0.25
PRPF39-201ENST00000355765 USP24Q9UPU5 2620 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms