RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 BVES-AS1Q5T3Y7 98 aa12.04□□□□□ -0.48
VPS13B-201ENST00000355155 CHAC1Q9BUX1 264 aa12.04□□□□□ -0.48
VPS13B-201ENST00000355155 TRBV25-1A0A075B6N4 114 aa12.04□□□□□ -0.48
VPS13B-201ENST00000355155 G3V4G9 280 aa12.04□□□□□ -0.48
VPS13B-201ENST00000355155 HSD52Q0P140 79 aa12.04□□□□□ -0.48
VPS13B-201ENST00000355155 TAL2Q16559 108 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 ATP5G1P05496 136 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 DAD1P61803 113 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 COL5A1-AS1Q5SY13 56 aa12.03□□□□□ -0.48
VPS13B-201ENST00000355155 MYMXA0A1B0GTQ4 84 aa12.02□□□□□ -0.48
VPS13B-201ENST00000355155 LEPROTO15243 131 aa12.02□□□□□ -0.49
VPS13B-201ENST00000355155 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.49
VPS13B-201ENST00000355155 JMJD1CQ15652 2540 aa12.02□□□□□ -0.49
VPS13B-201ENST00000355155 CEMP1Q6PRD7 247 aaPredicted RBP12.01□□□□□ -0.49
VPS13B-201ENST00000355155 A0A0J9YXV3 536 aa12.01□□□□□ -0.49
VPS13B-201ENST00000355155 H3BNG1 76 aa12.01□□□□□ -0.49
VPS13B-201ENST00000355155 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
VPS13B-201ENST00000355155 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
VPS13B-201ENST00000355155 GYPEP15421 78 aa12□□□□□ -0.49
VPS13B-201ENST00000355155 SEC11AP67812 179 aa12□□□□□ -0.49
VPS13B-201ENST00000355155 MPV17L2Q567V2 206 aa12□□□□□ -0.49
VPS13B-201ENST00000355155 A0A1B0GUV1 79 aa11.99□□□□□ -0.49
VPS13B-201ENST00000355155 PAX4O43316 350 aa11.99□□□□□ -0.49
VPS13B-201ENST00000355155 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
VPS13B-201ENST00000355155 HINT1P49773 126 aaPredicted RBP11.98□□□□□ -0.49
VPS13B-201ENST00000355155 OR5A1Q8NGJ0 315 aa11.98□□□□□ -0.49
VPS13B-201ENST00000355155 TMEM170BQ5T4T1 132 aa11.97□□□□□ -0.49
VPS13B-201ENST00000355155 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
VPS13B-201ENST00000355155 UBE2L6O14933 153 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 HERVK_113P63121 156 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 C12orf74Q32Q52 190 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 LURAP1LQ8IV03 231 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 TMEM101Q96IK0 257 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 TTTY13Q9BZ97 58 aa11.96□□□□□ -0.49
VPS13B-201ENST00000355155 TRAV8-6A0A0B4J262 113 aa11.96□□□□□ -0.5
VPS13B-201ENST00000355155 SPANXB1Q9NS25 103 aaPredicted RBP11.96□□□□□ -0.5
VPS13B-201ENST00000355155 IGHV1-58A0A0C4DH39 117 aa11.95□□□□□ -0.5
VPS13B-201ENST00000355155 TSPEAR-AS2P59090 65 aa11.95□□□□□ -0.5
VPS13B-201ENST00000355155 LINC00242Q5T6M2 205 aa11.95□□□□□ -0.5
VPS13B-201ENST00000355155 J3QQQ9 107 aa11.95□□□□□ -0.5
VPS13B-201ENST00000355155 DEFB4AO15263 64 aa11.95□□□□□ -0.5
VPS13B-201ENST00000355155 ORAOV1Q8WV07 137 aa11.95□□□□□ -0.5
VPS13B-201ENST00000355155 TM2D3Q9BRN9 247 aa11.94□□□□□ -0.5
VPS13B-201ENST00000355155 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
VPS13B-201ENST00000355155 TCTAP57738 103 aa11.93□□□□□ -0.5
VPS13B-201ENST00000355155 MRPL23Q16540 153 aaKnown RBP11.93□□□□□ -0.5
VPS13B-201ENST00000355155 ZNF815PA8K554 130 aa11.92□□□□□ -0.5
VPS13B-201ENST00000355155 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
VPS13B-201ENST00000355155 A0A1B0GV90 55 aa11.92□□□□□ -0.5
VPS13B-201ENST00000355155 H3BRM9 83 aa11.92□□□□□ -0.5
VPS13B-201ENST00000355155 CCL25O15444 150 aa11.92□□□□□ -0.5
VPS13B-201ENST00000355155 RNASE13Q5GAN3 156 aaKnown RBP11.92□□□□□ -0.5
VPS13B-201ENST00000355155 CEND1Q8N111 149 aa11.92□□□□□ -0.5
VPS13B-201ENST00000355155 K7EIL1 84 aa11.91□□□□□ -0.5
VPS13B-201ENST00000355155 RETNQ9HD89 108 aa11.91□□□□□ -0.5
VPS13B-201ENST00000355155 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
VPS13B-201ENST00000355155 A0A0J9YY99 117 aa11.91□□□□□ -0.5
VPS13B-201ENST00000355155 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
VPS13B-201ENST00000355155 BATFQ16520 125 aa11.9□□□□□ -0.5
VPS13B-201ENST00000355155 LINC01561Q8N1V8 128 aa11.9□□□□□ -0.5
VPS13B-201ENST00000355155 GEMIN7Q9H840 131 aaKnown RBP11.9□□□□□ -0.5
VPS13B-201ENST00000355155 NOTCH3Q9UM47 2321 aa11.9□□□□□ -0.5
VPS13B-201ENST00000355155 F5H768 121 aa11.9□□□□□ -0.5
VPS13B-201ENST00000355155 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.5
VPS13B-201ENST00000355155 COX6A2Q02221 97 aa11.9□□□□□ -0.5
VPS13B-201ENST00000355155 SPATA25Q9BR10 227 aa11.9□□□□□ -0.5
VPS13B-201ENST00000355155 GAGE6Q13070 117 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 A0A096LPF7 62 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 TAX1BP3O14907 124 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 LELP1Q5T871 98 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 MDFIQ99750 246 aa11.89□□□□□ -0.51
VPS13B-201ENST00000355155 A0A1B0GWB2 263 aa11.88□□□□□ -0.51
VPS13B-201ENST00000355155 A6NDN8 102 aa11.88□□□□□ -0.51
VPS13B-201ENST00000355155 CHCHD5Q9BSY4 110 aa11.88□□□□□ -0.51
VPS13B-201ENST00000355155 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
VPS13B-201ENST00000355155 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
VPS13B-201ENST00000355155 MAST4O15021 2626 aa11.87□□□□□ -0.51
VPS13B-201ENST00000355155 COX11Q9Y6N1 276 aa11.87□□□□□ -0.51
VPS13B-201ENST00000355155 TIMM17BO60830 172 aa11.87□□□□□ -0.51
VPS13B-201ENST00000355155 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
VPS13B-201ENST00000355155 RBX1P62877 108 aa11.86□□□□□ -0.51
VPS13B-201ENST00000355155 NDUFA1O15239 70 aa11.85□□□□□ -0.51
VPS13B-201ENST00000355155 FXYD2P54710 66 aa11.84□□□□□ -0.51
VPS13B-201ENST00000355155 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
VPS13B-201ENST00000355155 PPDPFQ9H3Y8 114 aa11.84□□□□□ -0.51
VPS13B-201ENST00000355155 TRAV8-3A0A0A6YYJ7 113 aa11.83□□□□□ -0.52
VPS13B-201ENST00000355155 IGHV3OR16-9A0A0B4J2B5 98 aa11.83□□□□□ -0.52
VPS13B-201ENST00000355155 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
VPS13B-201ENST00000355155 LINC00959A0A1B0GUT2 108 aa11.83□□□□□ -0.52
VPS13B-201ENST00000355155 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
VPS13B-201ENST00000355155 LITAFQ99732 161 aa11.83□□□□□ -0.52
VPS13B-201ENST00000355155 A0A0J9YXY3 114 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 Q6ZVH6 145 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms