RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 SMIM1B2RUZ4 78 aa13.98□□□□□ -0.17
PTPA-204ENST00000355007 ATOX1O00244 68 aa13.98□□□□□ -0.17
PTPA-204ENST00000355007 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
PTPA-204ENST00000355007 PTPRQQ9UMZ3 2332 aa13.98□□□□□ -0.17
PTPA-204ENST00000355007 FAM19A3Q7Z5A8 133 aa13.98□□□□□ -0.17
PTPA-204ENST00000355007 SPTAN1Q13813 2472 aaKnown RBP13.98□□□□□ -0.17
PTPA-204ENST00000355007 PRIMA1Q86XR5 153 aa13.97□□□□□ -0.17
PTPA-204ENST00000355007 MALP21145 153 aa13.97□□□□□ -0.17
PTPA-204ENST00000355007 NBASA2RRP1 2371 aa13.97□□□□□ -0.17
PTPA-204ENST00000355007 CELSR1Q9NYQ6 3014 aa13.96□□□□□ -0.17
PTPA-204ENST00000355007 PRM2P04554 102 aa13.96□□□□□ -0.18
PTPA-204ENST00000355007 HIST2H2BCQ6DN03 193 aa13.96□□□□□ -0.18
PTPA-204ENST00000355007 HIST2H2BDQ6DRA6 164 aa13.96□□□□□ -0.18
PTPA-204ENST00000355007 SYNJ2BPP57105 145 aa13.95□□□□□ -0.18
PTPA-204ENST00000355007 A8MTW9 85 aa13.94□□□□□ -0.18
PTPA-204ENST00000355007 PF4P02776 101 aa13.94□□□□□ -0.18
PTPA-204ENST00000355007 RPL28P46779 137 aaKnown RBP13.94□□□□□ -0.18
PTPA-204ENST00000355007 SORL1Q92673 2214 aa13.93□□□□□ -0.18
PTPA-204ENST00000355007 IGHV4-61A0A0C4DH41 118 aa13.93□□□□□ -0.18
PTPA-204ENST00000355007 Q9HAA7 133 aa13.93□□□□□ -0.18
PTPA-204ENST00000355007 RPS28P62857 69 aaKnown RBP13.93□□□□□ -0.18
PTPA-204ENST00000355007 KLRB1Q12918 225 aa13.93□□□□□ -0.18
PTPA-204ENST00000355007 C10orf99Q6UWK7 81 aa13.93□□□□□ -0.18
PTPA-204ENST00000355007 TRAV13-2A0A0B4J235 113 aa13.92□□□□□ -0.18
PTPA-204ENST00000355007 TMEM89A2RUT3 159 aa13.92□□□□□ -0.18
PTPA-204ENST00000355007 OVOL2Q9BRP0 275 aa13.92□□□□□ -0.18
PTPA-204ENST00000355007 AKAP6Q13023 2319 aa13.91□□□□□ -0.18
PTPA-204ENST00000355007 C5orf47Q569G3 176 aa13.91□□□□□ -0.18
PTPA-204ENST00000355007 FAM19A5Q7Z5A7 132 aaPredicted RBP13.91□□□□□ -0.18
PTPA-204ENST00000355007 ZFHX2Q9C0A1 2572 aaPredicted RBP13.91□□□□□ -0.18
PTPA-204ENST00000355007 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
PTPA-204ENST00000355007 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
PTPA-204ENST00000355007 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
PTPA-204ENST00000355007 RPL18AQ02543 176 aaKnown RBP13.91□□□□□ -0.18
PTPA-204ENST00000355007 C11orf72Q8NBR9 251 aa13.91□□□□□ -0.18
PTPA-204ENST00000355007 DNAL4O96015 105 aa13.9□□□□□ -0.18
PTPA-204ENST00000355007 F5H768 121 aa13.9□□□□□ -0.18
PTPA-204ENST00000355007 RS1O15537 224 aa13.9□□□□□ -0.18
PTPA-204ENST00000355007 DEFB131AP59861 70 aa13.9□□□□□ -0.18
PTPA-204ENST00000355007 PIMREGQ9BSJ6 248 aa13.9□□□□□ -0.18
PTPA-204ENST00000355007 CRPP02741 224 aa13.89□□□□□ -0.19
PTPA-204ENST00000355007 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
PTPA-204ENST00000355007 hADV29S1A0JD25 119 aa13.89□□□□□ -0.19
PTPA-204ENST00000355007 HOXD3P31249 432 aaPredicted RBP13.88□□□□□ -0.19
PTPA-204ENST00000355007 SMIM9A6NGZ8 99 aa13.88□□□□□ -0.19
PTPA-204ENST00000355007 CEP295Q9C0D2 2601 aa13.87□□□□□ -0.19
PTPA-204ENST00000355007 Q6JHZ5 121 aa13.87□□□□□ -0.19
PTPA-204ENST00000355007 LINC00337Q8N6G1 96 aa13.86□□□□□ -0.19
PTPA-204ENST00000355007 OBSCN-AS1Q96MR7 158 aa13.85□□□□□ -0.19
PTPA-204ENST00000355007 CYSTM1Q9H1C7 97 aa13.85□□□□□ -0.19
PTPA-204ENST00000355007 A0A087WYN8 130 aa13.84□□□□□ -0.19
PTPA-204ENST00000355007 C14orf132Q9NPU4 83 aa13.84□□□□□ -0.19
PTPA-204ENST00000355007 IGKV2-28A0A075B6P5 120 aa13.84□□□□□ -0.19
PTPA-204ENST00000355007 IGKV2D-28P01615 120 aa13.84□□□□□ -0.19
PTPA-204ENST00000355007 TMEM258P61165 79 aa13.84□□□□□ -0.19
PTPA-204ENST00000355007 C9orf129Q5T035 196 aaKnown RBP13.84□□□□□ -0.19
PTPA-204ENST00000355007 SERP2Q8N6R1 65 aa13.83□□□□□ -0.2
PTPA-204ENST00000355007 C10orf105Q8TEF2 133 aa13.83□□□□□ -0.2
PTPA-204ENST00000355007 CDC42SE2Q9NRR3 84 aa13.83□□□□□ -0.2
PTPA-204ENST00000355007 IGKV3D-7A0A0C4DH55 119 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 MSMBP08118 114 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 OR13C6PQ8NH95 151 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 SND1-IT1Q9HBX3 110 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 LINC00846Q9NV44 126 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 SMIM11BQ8TCY0 68 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 Q96MF0 132 aa13.82□□□□□ -0.2
PTPA-204ENST00000355007 H0YGX0 51 aa13.81□□□□□ -0.2
PTPA-204ENST00000355007 IGHV4-59P01825 116 aa13.81□□□□□ -0.2
PTPA-204ENST00000355007 MIR7-3HGQ8N6C7 128 aa13.81□□□□□ -0.2
PTPA-204ENST00000355007 UPK3BQ9BT76 320 aa13.81□□□□□ -0.2
PTPA-204ENST00000355007 NTM-AS1Q6ZSK4 140 aa13.81□□□□□ -0.2
PTPA-204ENST00000355007 VPS13CQ709C8 3753 aa13.8□□□□□ -0.2
PTPA-204ENST00000355007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■■■□□ 15.2
PTPA-204ENST00000355007 AVPP01185 164 aa13.8□□□□□ -0.2
PTPA-204ENST00000355007 INSP01308 110 aa13.79□□□□□ -0.2
PTPA-204ENST00000355007 ATP5J2P56134 94 aa13.79□□□□□ -0.2
PTPA-204ENST00000355007 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
PTPA-204ENST00000355007 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
PTPA-204ENST00000355007 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
PTPA-204ENST00000355007 DPH3Q96FX2 82 aa13.79□□□□□ -0.2
PTPA-204ENST00000355007 UBE2E2Q96LR5 201 aa13.79□□□□□ -0.2
PTPA-204ENST00000355007 TRBV10-1A0A0K0K1A3 114 aa13.78□□□□□ -0.2
PTPA-204ENST00000355007 UCNP55089 124 aa13.78□□□□□ -0.2
PTPA-204ENST00000355007 LINC01561Q8N1V8 128 aa13.78□□□□□ -0.2
PTPA-204ENST00000355007 ATRXP46100 2492 aa13.77□□□□□ -0.2
PTPA-204ENST00000355007 COL12A1Q99715 3063 aa13.77□□□□□ -0.21
PTPA-204ENST00000355007 A0A087WVE0 104 aa13.77□□□□□ -0.21
PTPA-204ENST00000355007 C19orf84I3L1E1 186 aa13.77□□□□□ -0.21
PTPA-204ENST00000355007 COX7B2Q8TF08 81 aa13.77□□□□□ -0.21
PTPA-204ENST00000355007 USP17L23D6RBM5 183 aa13.76□□□□□ -0.21
PTPA-204ENST00000355007 IGHV4-30-2A0A087WSY4 118 aa13.75□□□□□ -0.21
PTPA-204ENST00000355007 K7EQD1 137 aa13.75□□□□□ -0.21
PTPA-204ENST00000355007 DEFB112Q30KQ8 113 aa13.75□□□□□ -0.21
PTPA-204ENST00000355007 MAP6D1Q9H9H5 199 aa13.75□□□□□ -0.21
PTPA-204ENST00000355007 KIR2DL5BQ8NHK3 375 aa13.75□□□□□ -0.21
PTPA-204ENST00000355007 LECT2O14960 151 aa13.74□□□□□ -0.21
PTPA-204ENST00000355007 SLURP1P55000 103 aa13.73□□□□□ -0.21
PTPA-204ENST00000355007 NBL1P41271 181 aa13.73□□□□□ -0.21
PTPA-204ENST00000355007 CCL18P55774 89 aa13.73□□□□□ -0.21
PTPA-204ENST00000355007 IL17DQ8TAD2 202 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms