RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DNAH7Q8WXX0 4024 aa10.77□□□□□ -0.69
CTSA-202ENST00000354880 MRPS36P82909 103 aaKnown RBP10.77□□□□□ -0.69
CTSA-202ENST00000354880 LELP1Q5T871 98 aa10.77□□□□□ -0.69
CTSA-202ENST00000354880 MRPL35Q9NZE8 188 aaKnown RBP10.77□□□□□ -0.69
CTSA-202ENST00000354880 DYNC2H1Q8NCM8 4307 aaKnown RBP10.76□□□□□ -0.69
CTSA-202ENST00000354880 ZNF25P17030 456 aaPredicted RBP10.76□□□□□ -0.69
CTSA-202ENST00000354880 TIRAPP58753 221 aa10.76□□□□□ -0.69
CTSA-202ENST00000354880 LYPD5Q6UWN5 251 aa10.76□□□□□ -0.69
CTSA-202ENST00000354880 Q6ZUT4 128 aa10.76□□□□□ -0.69
CTSA-202ENST00000354880 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
CTSA-202ENST00000354880 TMEM101Q96IK0 257 aa10.76□□□□□ -0.69
CTSA-202ENST00000354880 AMELXQ99217 191 aa10.76□□□□□ -0.69
CTSA-202ENST00000354880 CHTOPQ9Y3Y2 248 aaKnown RBP10.76□□□□□ -0.69
CTSA-202ENST00000354880 F8VRH5 84 aa10.75□□□□□ -0.69
CTSA-202ENST00000354880 S100A12P80511 92 aa10.75□□□□□ -0.69
CTSA-202ENST00000354880 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
CTSA-202ENST00000354880 OR5A1Q8NGJ0 315 aa10.75□□□□□ -0.69
CTSA-202ENST00000354880 TMEM262E9PQX1 116 aa10.74□□□□□ -0.69
CTSA-202ENST00000354880 CDC42SE2Q9NRR3 84 aa10.74□□□□□ -0.69
CTSA-202ENST00000354880 DPM2O94777 84 aa10.74□□□□□ -0.69
CTSA-202ENST00000354880 IGKCP01834 107 aa10.74□□□□□ -0.69
CTSA-202ENST00000354880 IGLL5B9A064 214 aa10.73□□□□□ -0.69
CTSA-202ENST00000354880 PLNP26678 52 aa10.73□□□□□ -0.69
CTSA-202ENST00000354880 ZNF664Q8N3J9 261 aa10.73□□□□□ -0.69
CTSA-202ENST00000354880 VAMP8Q9BV40 100 aa10.73□□□□□ -0.69
CTSA-202ENST00000354880 CSMD3Q7Z407 3707 aa10.73□□□□□ -0.69
CTSA-202ENST00000354880 A0A1B0GUV1 79 aa10.72□□□□□ -0.69
CTSA-202ENST00000354880 C2orf88Q9BSF0 95 aa10.72□□□□□ -0.69
CTSA-202ENST00000354880 IGLV4-60A0A075B6I1 120 aa10.72□□□□□ -0.69
CTSA-202ENST00000354880 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
CTSA-202ENST00000354880 ESRGQ1W209 222 aa10.72□□□□□ -0.69
CTSA-202ENST00000354880 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
CTSA-202ENST00000354880 IGLV4-69A0A075B6H9 119 aa10.71□□□□□ -0.69
CTSA-202ENST00000354880 TRAV8-6A0A0B4J262 113 aa10.71□□□□□ -0.69
CTSA-202ENST00000354880 RBX1P62877 108 aa10.71□□□□□ -0.69
CTSA-202ENST00000354880 MAJINQ3KP22 176 aa10.71□□□□□ -0.69
CTSA-202ENST00000354880 PAM16Q9Y3D7 125 aa10.71□□□□□ -0.69
CTSA-202ENST00000354880 PKIAP61925 76 aa10.7□□□□□ -0.7
CTSA-202ENST00000354880 hDV102S1A0JD36 115 aa10.7□□□□□ -0.7
CTSA-202ENST00000354880 HSBP1L1C9JCN9 74 aa10.7□□□□□ -0.7
CTSA-202ENST00000354880 PLECQ15149 4684 aaKnown RBP10.68□□□□□ -0.7
CTSA-202ENST00000354880 A0A0J9YXV3 536 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 C11orf86A6NJI1 115 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 IGLC3P0DOY3 106 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 UBE2D1P51668 147 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 SPATA45Q537H7 98 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 NFE4Q86UQ8 179 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 STPG4Q8N801 248 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 CHAC1Q9BUX1 264 aa10.68□□□□□ -0.7
CTSA-202ENST00000354880 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
CTSA-202ENST00000354880 Q8N3U1 123 aa10.67□□□□□ -0.7
CTSA-202ENST00000354880 WFDC10BQ8IUB3 73 aa10.66□□□□□ -0.7
CTSA-202ENST00000354880 TGP01266 2768 aa10.66□□□□□ -0.7
CTSA-202ENST00000354880 LYSTQ99698 3801 aa10.66□□□□□ -0.7
CTSA-202ENST00000354880 TINCRA0A1B0GVN0 87 aa10.65□□□□□ -0.7
CTSA-202ENST00000354880 NUPR2A6NF83 97 aa10.65□□□□□ -0.7
CTSA-202ENST00000354880 CCL18P55774 89 aa10.65□□□□□ -0.7
CTSA-202ENST00000354880 STARD9Q9P2P6 4700 aa10.65□□□□□ -0.7
CTSA-202ENST00000354880 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.71
CTSA-202ENST00000354880 ANGP03950 147 aaKnown RBP10.65□□□□□ -0.71
CTSA-202ENST00000354880 SEC11AP67812 179 aa10.64□□□□□ -0.71
CTSA-202ENST00000354880 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
CTSA-202ENST00000354880 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
CTSA-202ENST00000354880 FAM19A3Q7Z5A8 133 aa10.64□□□□□ -0.71
CTSA-202ENST00000354880 GEMIN7Q9H840 131 aaKnown RBP10.64□□□□□ -0.71
CTSA-202ENST00000354880 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
CTSA-202ENST00000354880 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
CTSA-202ENST00000354880 LINC00242Q5T6M2 205 aa10.63□□□□□ -0.71
CTSA-202ENST00000354880 LINC00269Q8N2A0 174 aa10.63□□□□□ -0.71
CTSA-202ENST00000354880 PRO1933Q9H354 126 aa10.63□□□□□ -0.71
CTSA-202ENST00000354880 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
CTSA-202ENST00000354880 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
CTSA-202ENST00000354880 TCTAP57738 103 aa10.63□□□□□ -0.71
CTSA-202ENST00000354880 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
CTSA-202ENST00000354880 IGHV3-30P01768 117 aa10.62□□□□□ -0.71
CTSA-202ENST00000354880 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
CTSA-202ENST00000354880 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
CTSA-202ENST00000354880 IGHV3-30-5P0DP03 117 aa10.62□□□□□ -0.71
CTSA-202ENST00000354880 HERVK_113P63121 156 aa10.62□□□□□ -0.71
CTSA-202ENST00000354880 CLPSL2Q6UWE3 100 aa10.62□□□□□ -0.71
CTSA-202ENST00000354880 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 TSTD3H0UI37 97 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 REG3AQ06141 175 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 TENM2Q9NT68 2774 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 COX6A2Q02221 97 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
CTSA-202ENST00000354880 IGLV5-45A0A087WSX0 123 aa10.6□□□□□ -0.71
CTSA-202ENST00000354880 HERVK_113P61574 105 aa10.6□□□□□ -0.71
CTSA-202ENST00000354880 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 CCL25O15444 150 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 NMUP48645 174 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 SS18Q15532 418 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 PRR34Q9NV39 138 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 CDKN2A-AS1Q9UH64 79 aa10.59□□□□□ -0.71
CTSA-202ENST00000354880 IGKV2D-26A0A0A0MRZ7 120 aa10.58□□□□□ -0.72
CTSA-202ENST00000354880 E9PLD3 99 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms