RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 NDUFA1O15239 70 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 IFITM1P13164 125 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 KRTAP10-9P60411 292 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
DDX4-201ENST00000353507 DEFB113Q30KQ7 82 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 ODF3L2Q3SX64 289 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 Q96MF0 132 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 RPL13AP40429 203 aaKnown RBP8.74□□□□□ -1.01
DDX4-201ENST00000353507 HERVK_113P63121 156 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 DAND5Q8N907 189 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 TMEM101Q96IK0 257 aa8.74□□□□□ -1.01
DDX4-201ENST00000353507 IGLV5-45A0A087WSX0 123 aa8.73□□□□□ -1.01
DDX4-201ENST00000353507 Q6ZSV7 163 aa8.73□□□□□ -1.01
DDX4-201ENST00000353507 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
DDX4-201ENST00000353507 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
DDX4-201ENST00000353507 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
DDX4-201ENST00000353507 UBE2WQ96B02 151 aa8.73□□□□□ -1.01
DDX4-201ENST00000353507 RNF183Q96D59 192 aa8.73□□□□□ -1.01
DDX4-201ENST00000353507 A0A1W2PRX2 142 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 C11orf44Q8N8P7 122 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 Q9H8V8 135 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 TRAV25A0A0B4J276 109 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 K7EQD1 137 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 COX6A2Q02221 97 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.72□□□□□ -1.01
DDX4-201ENST00000353507 CLEC2BQ92478 149 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 NOTCH3Q9UM47 2321 aa8.72□□□□□ -1.01
DDX4-201ENST00000353507 CHD6Q8TD26 2715 aa8.71□□□□□ -1.01
DDX4-201ENST00000353507 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
DDX4-201ENST00000353507 LINC00694P0DN24 101 aa8.71□□□□□ -1.02
DDX4-201ENST00000353507 LINC00242Q5T6M2 205 aa8.71□□□□□ -1.02
DDX4-201ENST00000353507 LRRC75A-AS1Q8N1F1 130 aa8.71□□□□□ -1.02
DDX4-201ENST00000353507 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 H3BT86 120 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
DDX4-201ENST00000353507 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 EPG5Q9HCE0 2579 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 SONP18583 2426 aaKnown RBP8.7□□□□□ -1.02
DDX4-201ENST00000353507 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 H7C423 109 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 SNCGO76070 127 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
DDX4-201ENST00000353507 Q6ZTI0 123 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
DDX4-201ENST00000353507 TEX29Q8N6K0 151 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 IL17DQ8TAD2 202 aa8.7□□□□□ -1.02
DDX4-201ENST00000353507 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
DDX4-201ENST00000353507 IGLV5-39A0A0G2JS06 123 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 LST1O00453 97 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 TMEM86BQ8N661 226 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 GAGE4Q13068 117 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 GAGE5Q13069 117 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
DDX4-201ENST00000353507 NDUFA7O95182 113 aa8.68□□□□□ -1.02
DDX4-201ENST00000353507 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
DDX4-201ENST00000353507 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
DDX4-201ENST00000353507 CCL24O00175 119 aa8.68□□□□□ -1.02
DDX4-201ENST00000353507 UBE2L6O14933 153 aa8.68□□□□□ -1.02
DDX4-201ENST00000353507 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
DDX4-201ENST00000353507 DNAJC9-AS1A6NH13 148 aa8.67□□□□□ -1.02
DDX4-201ENST00000353507 CSDC2Q9Y534 153 aaKnown RBP8.67□□□□□ -1.02
DDX4-201ENST00000353507 USP24Q9UPU5 2620 aa8.67□□□□□ -1.02
DDX4-201ENST00000353507 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
DDX4-201ENST00000353507 ANAPC13Q9BS18 74 aa8.67□□□□□ -1.02
DDX4-201ENST00000353507 NOP10Q9NPE3 64 aaKnown RBP8.67□□□□□ -1.02
DDX4-201ENST00000353507 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 CITED1Q99966 193 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 C2CD3Q4AC94 2353 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 UBR5O95071 2799 aaPredicted RBP8.66□□□□□ -1.02
DDX4-201ENST00000353507 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 BBC3Q96PG8 261 aaPredicted RBP8.66□□□□□ -1.02
DDX4-201ENST00000353507 CITED2Q99967 270 aaPredicted RBP8.66□□□□□ -1.02
DDX4-201ENST00000353507 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
DDX4-201ENST00000353507 TRAV26-1A0A087WT03 109 aa8.65□□□□□ -1.02
DDX4-201ENST00000353507 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
DDX4-201ENST00000353507 TRGV2A0A075B6R0 118 aa8.64□□□□□ -1.03
DDX4-201ENST00000353507 JMJD1CQ15652 2540 aa8.64□□□□□ -1.03
DDX4-201ENST00000353507 ITPR3Q14573 2671 aa8.64□□□□□ -1.03
DDX4-201ENST00000353507 AKAP9Q99996 3911 aa8.64□□□□□ -1.03
DDX4-201ENST00000353507 HERV-K104P63124 156 aa8.64□□□□□ -1.03
DDX4-201ENST00000353507 C15orf53Q8NAA6 179 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 SETD2Q9BYW2 2564 aaPredicted RBP8.63□□□□□ -1.03
DDX4-201ENST00000353507 COX7A2LO14548 114 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 CRLF1O75462 422 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 GAGE7O76087 117 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
DDX4-201ENST00000353507 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms