RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 KNCNA6PVL3 124 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 VCX2Q9H322 139 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 RBMY1BA6NDE4 496 aaKnown RBP6.24□□□□□ -1.41
TRIM55-204ENST00000353317 RBMY1EA6NEQ0 496 aaKnown RBP6.24□□□□□ -1.41
TRIM55-204ENST00000353317 C9JAW5 83 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 SLC25A20O43772 301 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 RBMY1DP0C7P1 496 aaKnown RBP6.24□□□□□ -1.41
TRIM55-204ENST00000353317 DEFB131AP59861 70 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 KRTAP24-1Q3LI83 254 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
TRIM55-204ENST00000353317 A0A0B4J2C4 111 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 SPXQ9BT56 116 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 GEMIN7Q9H840 131 aaKnown RBP6.23□□□□□ -1.41
TRIM55-204ENST00000353317 ERG28Q9UKR5 140 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 A0A0J9YXY3 114 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 ODF3L2Q3SX64 289 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 CEMP1Q6PRD7 247 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-204ENST00000353317 DYNLRB2Q8TF09 96 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 CITED1Q99966 193 aa6.23□□□□□ -1.41
TRIM55-204ENST00000353317 IGHV3-73A0A0B4J1V6 119 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 M0R2P5 195 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 PRM2P04554 102 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 RBMY1A1P0DJD3 496 aaKnown RBP6.22□□□□□ -1.41
TRIM55-204ENST00000353317 RBMY1CP0DJD4 496 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 RBMY1FQ15415 496 aaKnown RBP6.22□□□□□ -1.41
TRIM55-204ENST00000353317 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 WFDC10AQ9H1F0 79 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 MAP6D1Q9H9H5 199 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 NBEAL2Q6ZNJ1 2754 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 TRAV8-3A0A0A6YYJ7 113 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 HTN1P15515 57 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 Q9UF83 564 aa6.22□□□□□ -1.41
TRIM55-204ENST00000353317 IGLV1-51P01701 117 aa6.21□□□□□ -1.41
TRIM55-204ENST00000353317 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.41
TRIM55-204ENST00000353317 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.41
TRIM55-204ENST00000353317 LITAFQ99732 161 aa6.21□□□□□ -1.41
TRIM55-204ENST00000353317 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-204ENST00000353317 MRPS36P82909 103 aaKnown RBP6.21□□□□□ -1.42
TRIM55-204ENST00000353317 Q1RN00 199 aa6.21□□□□□ -1.42
TRIM55-204ENST00000353317 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.42
TRIM55-204ENST00000353317 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
TRIM55-204ENST00000353317 TRGV11A0A075B6L2 103 aa6.2□□□□□ -1.42
TRIM55-204ENST00000353317 H3BMM0 161 aa6.2□□□□□ -1.42
TRIM55-204ENST00000353317 M0QXV9 152 aa6.2□□□□□ -1.42
TRIM55-204ENST00000353317 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
TRIM55-204ENST00000353317 C19orf73Q9NVV2 129 aa6.2□□□□□ -1.42
TRIM55-204ENST00000353317 A8MZ25 164 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 TMEM262E9PQX1 116 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 TRIAP1O43715 76 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 PRSS2P07478 247 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 LINC01620Q4KN68 170 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 NTN5Q8WTR8 489 aaPredicted RBP6.19□□□□□ -1.42
TRIM55-204ENST00000353317 ANK2Q01484 3957 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 IGHV1-58A0A0C4DH39 117 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 A8MTW9 85 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 ATXN8Q156A1 80 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 EDA2RQ9HAV5 297 aa6.19□□□□□ -1.42
TRIM55-204ENST00000353317 TRBV30A0A0K0K1B3 111 aa6.18□□□□□ -1.42
TRIM55-204ENST00000353317 PF4P02776 101 aa6.18□□□□□ -1.42
TRIM55-204ENST00000353317 Q6ZSN1 163 aa6.18□□□□□ -1.42
TRIM55-204ENST00000353317 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
TRIM55-204ENST00000353317 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
TRIM55-204ENST00000353317 TNFRSF18Q9Y5U5 241 aa6.18□□□□□ -1.42
TRIM55-204ENST00000353317 TRAV25A0A0B4J276 109 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 NPC2P61916 151 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 BEAN1Q3B7T3 259 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 RNF183Q96D59 192 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 VSIG2Q96IQ7 327 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 CHCHD7Q9BUK0 85 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 NACAE9PAV3 2078 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-204ENST00000353317 IGKV2-29A2NJV5 120 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-204ENST00000353317 SPANXDQ9BXN6 97 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 SPANXCQ9NY87 97 aa6.17□□□□□ -1.42
TRIM55-204ENST00000353317 TRBV10-2A0A0K0K1G8 114 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 TINCRA0A1B0GVN0 87 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 GIG44P09565 113 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-204ENST00000353317 ZFAND6Q6FIF0 208 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 LINC01600Q96MT4 127 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 ICOSQ9Y6W8 199 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 NOTCH1P46531 2555 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 MIAQ16674 131 aa6.16□□□□□ -1.42
TRIM55-204ENST00000353317 TRAV4A0A0B4J268 109 aa6.15□□□□□ -1.42
TRIM55-204ENST00000353317 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
TRIM55-204ENST00000353317 RPL13AP40429 203 aaKnown RBP6.15□□□□□ -1.42
TRIM55-204ENST00000353317 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.42
TRIM55-204ENST00000353317 ANAPC13Q9BS18 74 aa6.15□□□□□ -1.42
TRIM55-204ENST00000353317 H7C423 109 aa6.15□□□□□ -1.43
TRIM55-204ENST00000353317 SPANXA1Q9NS26 97 aa6.15□□□□□ -1.43
TRIM55-204ENST00000353317 DAND5Q8N907 189 aa6.14□□□□□ -1.43
TRIM55-204ENST00000353317 XCL2Q9UBD3 114 aa6.14□□□□□ -1.43
TRIM55-204ENST00000353317 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
TRIM55-204ENST00000353317 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
TRIM55-204ENST00000353317 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
TRIM55-204ENST00000353317 NBEAL1Q6ZS30 2694 aa6.14□□□□□ -1.43
TRIM55-204ENST00000353317 SNCGO76070 127 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 NHLRC4P0CG21 123 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms