RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RNF152Q8N8N0 203 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 ATP5J2P56134 94 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 DSCR9P59020 149 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
TRAF3-202ENST00000351691 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
TRAF3-202ENST00000351691 BAALC-AS2P0C853 105 aa10.89□□□□□ -0.67
TRAF3-202ENST00000351691 CFHR3Q02985 330 aa10.89□□□□□ -0.67
TRAF3-202ENST00000351691 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
TRAF3-202ENST00000351691 UBE2D4Q9Y2X8 147 aa10.88□□□□□ -0.67
TRAF3-202ENST00000351691 MED13LQ71F56 2210 aa10.88□□□□□ -0.67
TRAF3-202ENST00000351691 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
TRAF3-202ENST00000351691 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
TRAF3-202ENST00000351691 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
TRAF3-202ENST00000351691 B4DSR2 109 aa10.87□□□□□ -0.67
TRAF3-202ENST00000351691 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
TRAF3-202ENST00000351691 CSMD2Q7Z408 3487 aa10.87□□□□□ -0.67
TRAF3-202ENST00000351691 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
TRAF3-202ENST00000351691 CHCHD7Q9BUK0 85 aa10.86□□□□□ -0.67
TRAF3-202ENST00000351691 IGKV3-7A0A075B6H7 116 aa10.86□□□□□ -0.67
TRAF3-202ENST00000351691 A8MZ25 164 aa10.86□□□□□ -0.67
TRAF3-202ENST00000351691 TMEM258P61165 79 aa10.86□□□□□ -0.67
TRAF3-202ENST00000351691 BLCAPP62952 87 aa10.86□□□□□ -0.67
TRAF3-202ENST00000351691 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
TRAF3-202ENST00000351691 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
TRAF3-202ENST00000351691 PIK3CD-AS1Q5SR53 167 aa10.85□□□□□ -0.67
TRAF3-202ENST00000351691 RPL18AQ02543 176 aaKnown RBP10.84□□□□□ -0.67
TRAF3-202ENST00000351691 CENPEQ02224 2701 aa10.84□□□□□ -0.67
TRAF3-202ENST00000351691 OVOL2Q9BRP0 275 aa10.84□□□□□ -0.67
TRAF3-202ENST00000351691 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
TRAF3-202ENST00000351691 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
TRAF3-202ENST00000351691 PF4P02776 101 aa10.83□□□□□ -0.68
TRAF3-202ENST00000351691 CDKN2A-AS1Q9UH64 79 aa10.83□□□□□ -0.68
TRAF3-202ENST00000351691 FAM19A3Q7Z5A8 133 aa10.82□□□□□ -0.68
TRAF3-202ENST00000351691 TENM4Q6N022 2769 aa10.82□□□□□ -0.68
TRAF3-202ENST00000351691 RNASE13Q5GAN3 156 aaKnown RBP10.82□□□□□ -0.68
TRAF3-202ENST00000351691 Q6JHZ5 121 aa10.82□□□□□ -0.68
TRAF3-202ENST00000351691 CELSR2Q9HCU4 2923 aa10.82□□□□□ -0.68
TRAF3-202ENST00000351691 SVEP1Q4LDE5 3571 aa10.82□□□□□ -0.68
TRAF3-202ENST00000351691 TRAV12-2A0A075B6T6 113 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 J3QLI3 93 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 MALP21145 153 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 SNRPD3P62318 126 aaKnown RBP10.81□□□□□ -0.68
TRAF3-202ENST00000351691 FBN2P35556 2912 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 MAP1AP78559 2803 aaPredicted RBP10.81□□□□□ -0.68
TRAF3-202ENST00000351691 hADV29S1A0JD25 119 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 PSMB8P28062 276 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 Q8N2B8 174 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 SERP2Q8N6R1 65 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 Q9H8V8 135 aa10.81□□□□□ -0.68
TRAF3-202ENST00000351691 SOSTDC1Q6X4U4 206 aa10.8□□□□□ -0.68
TRAF3-202ENST00000351691 LINC01356Q8N9X3 169 aa10.8□□□□□ -0.68
TRAF3-202ENST00000351691 ANKRD17O75179 2603 aaKnown RBP10.8□□□□□ -0.68
TRAF3-202ENST00000351691 AVPP01185 164 aa10.8□□□□□ -0.68
TRAF3-202ENST00000351691 RPL28P46779 137 aaKnown RBP10.8□□□□□ -0.68
TRAF3-202ENST00000351691 PRIMA1Q86XR5 153 aa10.8□□□□□ -0.68
TRAF3-202ENST00000351691 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
TRAF3-202ENST00000351691 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
TRAF3-202ENST00000351691 NBPF19A0A087WUL8 3843 aa10.79□□□□□ -0.68
TRAF3-202ENST00000351691 K7EQG2 157 aa10.79□□□□□ -0.68
TRAF3-202ENST00000351691 HIST2H2BCQ6DN03 193 aa10.79□□□□□ -0.68
TRAF3-202ENST00000351691 HIST2H2BDQ6DRA6 164 aa10.79□□□□□ -0.68
TRAF3-202ENST00000351691 USP9YO00507 2555 aaPredicted RBP10.79□□□□□ -0.68
TRAF3-202ENST00000351691 POLQO75417 2590 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 OBSCN-AS1Q96MR7 158 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
TRAF3-202ENST00000351691 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.68
TRAF3-202ENST00000351691 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.68
TRAF3-202ENST00000351691 DEFB112Q30KQ8 113 aa10.77□□□□□ -0.69
TRAF3-202ENST00000351691 ZNF625Q96I27 306 aaPredicted RBP10.77□□□□□ -0.69
TRAF3-202ENST00000351691 DNAL4O96015 105 aa10.76□□□□□ -0.69
TRAF3-202ENST00000351691 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.76□□□□□ -0.69
TRAF3-202ENST00000351691 CELSR1Q9NYQ6 3014 aa10.75□□□□□ -0.69
TRAF3-202ENST00000351691 IGKV3-20P01619 116 aa10.75□□□□□ -0.69
TRAF3-202ENST00000351691 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
TRAF3-202ENST00000351691 PROK1P58294 105 aa10.75□□□□□ -0.69
TRAF3-202ENST00000351691 ABCA12Q86UK0 2595 aa10.75□□□□□ -0.69
TRAF3-202ENST00000351691 ZFHX3Q15911 3703 aa10.75□□□□□ -0.69
TRAF3-202ENST00000351691 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
TRAF3-202ENST00000351691 EDN2P20800 178 aa10.74□□□□□ -0.69
TRAF3-202ENST00000351691 COX6A2Q02221 97 aa10.74□□□□□ -0.69
TRAF3-202ENST00000351691 LINC00242Q5T6M2 205 aa10.74□□□□□ -0.69
TRAF3-202ENST00000351691 CSMD1Q96PZ7 3565 aa10.74□□□□□ -0.69
TRAF3-202ENST00000351691 PTPN13Q12923 2485 aa10.74□□□□□ -0.69
TRAF3-202ENST00000351691 IGHV3OR16-12A0A075B7B8 117 aa10.73□□□□□ -0.69
TRAF3-202ENST00000351691 A0A096LNT2 108 aa10.73□□□□□ -0.69
TRAF3-202ENST00000351691 IGHV3-73A0A0B4J1V6 119 aa10.73□□□□□ -0.69
TRAF3-202ENST00000351691 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
TRAF3-202ENST00000351691 NDUFC2-KCTD14E9PQ53 114 aa10.73□□□□□ -0.69
TRAF3-202ENST00000351691 CYSTM1Q9H1C7 97 aa10.73□□□□□ -0.69
TRAF3-202ENST00000351691 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
TRAF3-202ENST00000351691 A8MTW9 85 aa10.72□□□□□ -0.69
TRAF3-202ENST00000351691 H0YGX0 51 aa10.72□□□□□ -0.69
TRAF3-202ENST00000351691 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
TRAF3-202ENST00000351691 Q6ZSN1 163 aa10.72□□□□□ -0.69
TRAF3-202ENST00000351691 HELZ2Q9BYK8 2649 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms