RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 EMP1P54849 157 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 HERVK_113P61574 105 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 EGFEM1PQ0D2K5 195 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 GAGE1Q13065 139 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 GAGE4Q13068 117 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 GAGE5Q13069 117 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 TAL2Q16559 108 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 GAGE13Q4V321 117 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 CEMP1Q6PRD7 247 aaPredicted RBP4.88□□□□□ -1.63
TRIM55-203ENST00000350034 SHISA2Q6UWI4 295 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 CHAC1Q9BUX1 264 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 TM2D2Q9BX73 214 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 TRGV4A0A0C4DH28 118 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 LOC100131303A0A0U1RQF7 123 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 TINCRA0A1B0GVN0 87 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 A8MZ25 164 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 H7C423 109 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 LEPROTO15243 131 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 IGHV4-30-4P0DP06 118 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 TIRAPP58753 221 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 TMEM170BQ5T4T1 132 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 Q6ZUT4 128 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 FAM19A3Q7Z5A8 133 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 Q8NAQ8 132 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 RNF183Q96D59 192 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
TRIM55-203ENST00000350034 COX11Q9Y6N1 276 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 PRKDCP78527 4128 aaKnown RBP4.87□□□□□ -1.63
TRIM55-203ENST00000350034 VWFP04275 2813 aa4.87□□□□□ -1.63
TRIM55-203ENST00000350034 IGHV4-28A0A0C4DH34 117 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 MIFP14174 115 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 ZNF25P17030 456 aaPredicted RBP4.86□□□□□ -1.63
TRIM55-203ENST00000350034 UBE2D1P51668 147 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 KRTAP10-11P60412 298 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
TRIM55-203ENST00000350034 ZNF815PA8K554 130 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 H3BRM9 83 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 J3QQQ9 107 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 FXYD2P54710 66 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 SMAGPQ0VAQ4 97 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 OXLD1Q5BKU9 147 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
TRIM55-203ENST00000350034 Q6ZVH6 145 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 CEND1Q8N111 149 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 C3orf56Q8N813 242 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 PLEKHB2Q96CS7 222 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
TRIM55-203ENST00000350034 TRBV6-8A0A0A6YYG3 113 aa4.84□□□□□ -1.63
TRIM55-203ENST00000350034 IGHV1-58A0A0C4DH39 117 aa4.84□□□□□ -1.63
TRIM55-203ENST00000350034 A0A0J9YY99 117 aa4.84□□□□□ -1.63
TRIM55-203ENST00000350034 A6NDN8 102 aa4.84□□□□□ -1.63
TRIM55-203ENST00000350034 DGAT2L7PQ6IED9 249 aa4.84□□□□□ -1.63
TRIM55-203ENST00000350034 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
TRIM55-203ENST00000350034 PRO0255Q9UI72 69 aa4.84□□□□□ -1.63
TRIM55-203ENST00000350034 A0A1B0GWB2 263 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 K7EP13 123 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 IGHV3-30-3P0DP02 117 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 GYPEP15421 78 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 LGALS3P17931 250 aaKnown RBP4.83□□□□□ -1.64
TRIM55-203ENST00000350034 GCSHP23434 173 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 LINC00242Q5T6M2 205 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
TRIM55-203ENST00000350034 LINC00469Q8N7U9 141 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 ATP6V0E2Q8NHE4 81 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 VSIG2Q96IQ7 327 aa4.83□□□□□ -1.64
TRIM55-203ENST00000350034 IGLV5-39A0A0G2JS06 123 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 DEFB4AO15263 64 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 HERVK_113P63121 156 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 COX6A2Q02221 97 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 GEMIN7Q9H840 131 aaKnown RBP4.82□□□□□ -1.64
TRIM55-203ENST00000350034 CDKN2A-AS1Q9UH64 79 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
TRIM55-203ENST00000350034 TRAV26-1A0A087WT03 109 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 TRAV8-3A0A0A6YYJ7 113 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 TEX48A0A1B0GUV7 120 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 F5H768 121 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 UBE2L6O14933 153 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 PAX4O43316 350 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 ATP5G1P05496 136 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 SMIM13P0DJ93 91 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 DAD1P61803 113 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 GAGE6Q13070 117 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 UBE2V1Q13404 147 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 C12orf74Q32Q52 190 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 SAMD5Q5TGI4 173 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 AMMECR1LQ6DCA0 310 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 ZFAND6Q6FIF0 208 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 C10orf126Q8N4M7 172 aa4.81□□□□□ -1.64
TRIM55-203ENST00000350034 TMEM101Q96IK0 257 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms