RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 IGHV3-64A0A075B6Q5 118 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 FBXL19-AS1Q494R0 122 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 AGPAT4-IT1Q9H0P7 198 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 SDK2Q58EX2 2172 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 ASXL3Q9C0F0 2248 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 PRR3P79522 188 aaKnown RBP4.32□□□□□ -1.72
RFC1-201ENST00000349703 SBSPONQ8IVN8 264 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 ZNF407Q9C0G0 2248 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 CABIN1Q9Y6J0 2220 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 TRAV12-3A0A0B4J271 114 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 I3L3M4 83 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 LST1O00453 97 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 LYPD2Q6UXB3 125 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 RNASE6Q93091 150 aaKnown RBP4.32□□□□□ -1.72
RFC1-201ENST00000349703 ZNF80P51504 273 aaPredicted RBP4.31□□□□□ -1.72
RFC1-201ENST00000349703 SYCNQ0VAF6 134 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 NPBQ8NG41 125 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 NDUFA12Q9UI09 145 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 COL8A2P25067 703 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 EML6Q6ZMW3 1958 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
RFC1-201ENST00000349703 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 PCDH15Q96QU1 1955 aa4.31□□□□□ -1.72
RFC1-201ENST00000349703 IGHV3OR16-8A0A075B7F1 116 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 K7EQG2 157 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 MED12LQ86YW9 2145 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 TRAV7A0A075B6U4 112 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 FAM223BA6NKX1 122 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 FAM223AQ8IWN6 122 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 C8orf17Q9NRJ1 99 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 PI4KAP42356 2102 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 KIAA0100Q14667 2235 aaKnown RBP4.3□□□□□ -1.72
RFC1-201ENST00000349703 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 LY6DQ14210 128 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 RPL39LQ96EH5 51 aaKnown RBP4.3□□□□□ -1.72
RFC1-201ENST00000349703 SPRNQ5BIV9 151 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
RFC1-201ENST00000349703 KNTC1P50748 2209 aa4.3□□□□□ -1.72
RFC1-201ENST00000349703 SDK1Q7Z5N4 2213 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 GTF3C1Q12789 2109 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 H3BQ85 93 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 BPY2O14599 106 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 TRBV7-7A0A0K0K1E9 115 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 Q6ZRU5 148 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 LINC00526Q96FQ7 95 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 TANC2Q9HCD6 1990 aa4.29□□□□□ -1.72
RFC1-201ENST00000349703 COX7CP15954 63 aa4.28□□□□□ -1.72
RFC1-201ENST00000349703 XCL1P47992 114 aa4.28□□□□□ -1.72
RFC1-201ENST00000349703 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
RFC1-201ENST00000349703 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
RFC1-201ENST00000349703 VMO1Q7Z5L0 202 aa4.28□□□□□ -1.72
RFC1-201ENST00000349703 PRIMA1Q86XR5 153 aa4.28□□□□□ -1.72
RFC1-201ENST00000349703 RPS28P62857 69 aaKnown RBP4.27□□□□□ -1.73
RFC1-201ENST00000349703 LITAFQ99732 161 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 hADV29S1A0JD25 119 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 KLK5Q9Y337 293 aaPredicted RBP4.27□□□□□ -1.73
RFC1-201ENST00000349703 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 TM2D3Q9BRN9 247 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 NDUFC1O43677 76 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 PRB2P02812 416 aaPredicted RBP4.27□□□□□ -1.73
RFC1-201ENST00000349703 C1orf64Q8NEQ6 169 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 USMG5Q96IX5 58 aa4.27□□□□□ -1.73
RFC1-201ENST00000349703 NDUFA4O00483 81 aa4.26□□□□□ -1.73
RFC1-201ENST00000349703 ZFAND2AQ8N6M9 145 aa4.26□□□□□ -1.73
RFC1-201ENST00000349703 GNRH2O43555 120 aa4.26□□□□□ -1.73
RFC1-201ENST00000349703 CEP192Q8TEP8 1941 aa4.26□□□□□ -1.73
RFC1-201ENST00000349703 COX6B1P14854 86 aa4.26□□□□□ -1.73
RFC1-201ENST00000349703 PRB3Q04118 309 aaPredicted RBP4.26□□□□□ -1.73
RFC1-201ENST00000349703 TET2Q6N021 2002 aaPredicted RBP4.25□□□□□ -1.73
RFC1-201ENST00000349703 RPL39P62891 51 aaKnown RBP4.25□□□□□ -1.73
RFC1-201ENST00000349703 NDPQ00604 133 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 C7orf33Q8WU49 177 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 DSCR8Q96T75 97 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 ODF3Q96PU9 254 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 ADAMTS20P59510 1910 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 CACNA1GO43497 2377 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 TRBV6-5A0A0K0K1A5 114 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 A8MUN3 132 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 H0YGX0 51 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 NCR3O14931 201 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
RFC1-201ENST00000349703 C18orf65Q6ZTR6 163 aa4.25□□□□□ -1.73
RFC1-201ENST00000349703 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.25□□□□□ -1.73
RFC1-201ENST00000349703 ATP5EP2Q5VTU8 51 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 SERP2Q8N6R1 65 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 C11orf72Q8NBR9 251 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 HEATR1Q9H583 2144 aaKnown RBP4.24□□□□□ -1.73
RFC1-201ENST00000349703 DNAJC13O75165 2243 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 UTRNP46939 3433 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 IGFL2Q6UWQ7 119 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
RFC1-201ENST00000349703 IGIPA6NJ69 53 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms