RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 Q6ZTI0 123 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 H0YGX0 51 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 PSMB8P28062 276 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
CLCN6-202ENST00000346436 C1orf134Q5TEV5 83 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 HIST2H2BDQ6DRA6 164 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 PPDPFLQ8WWR9 84 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 PTH2Q96A98 100 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 CHD8Q9HCK8 2581 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 TNRC6BQ9UPQ9 1833 aaKnown RBP8.11□□□□□ -1.11
CLCN6-202ENST00000346436 PCSK5Q92824 1860 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 TRACP01848 142 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 DAND5Q8N907 189 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 SND1-IT1Q9HBX3 110 aa8.11□□□□□ -1.11
CLCN6-202ENST00000346436 LAMA1P25391 3075 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 SPEGQ15772 3267 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 TRBV20-1A0A075B6N2 111 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 RBX1P62877 108 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 CEMP1Q6PRD7 247 aaPredicted RBP8.1□□□□□ -1.11
CLCN6-202ENST00000346436 HIGD1BQ9P298 99 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 LINC00269Q8N2A0 174 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 A4D1N5 150 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 UBE2D3P61077 147 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
CLCN6-202ENST00000346436 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
CLCN6-202ENST00000346436 NTN5Q8WTR8 489 aaPredicted RBP8.09□□□□□ -1.11
CLCN6-202ENST00000346436 PRR9Q5T870 116 aa8.09□□□□□ -1.11
CLCN6-202ENST00000346436 CELSR3Q9NYQ7 3312 aa8.09□□□□□ -1.11
CLCN6-202ENST00000346436 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
CLCN6-202ENST00000346436 G3V4G9 280 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 C10orf99Q6UWK7 81 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 C2CD3Q4AC94 2353 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 BBC3Q96PG8 261 aaPredicted RBP8.08□□□□□ -1.12
CLCN6-202ENST00000346436 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 CFC1P0CG37 223 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
CLCN6-202ENST00000346436 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 LELP1Q5T871 98 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 IGLV5-52A0A0A0MRZ9 124 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 E9PLD3 99 aa8.08□□□□□ -1.12
CLCN6-202ENST00000346436 CHCHD10Q8WYQ3 142 aaPredicted RBP8.08□□□□□ -1.12
CLCN6-202ENST00000346436 ANKRD11Q6UB99 2663 aaPredicted RBP8.07□□□□□ -1.12
CLCN6-202ENST00000346436 MRGPRG-AS1Q2M3A8 158 aa8.07□□□□□ -1.12
CLCN6-202ENST00000346436 PRRC2AP48634 2157 aaKnown RBP8.06□□□□□ -1.12
CLCN6-202ENST00000346436 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
CLCN6-202ENST00000346436 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
CLCN6-202ENST00000346436 NCR3O14931 201 aa8.06□□□□□ -1.12
CLCN6-202ENST00000346436 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
CLCN6-202ENST00000346436 Q6ZS46 218 aa8.06□□□□□ -1.12
CLCN6-202ENST00000346436 ZFAND2AQ8N6M9 145 aa8.06□□□□□ -1.12
CLCN6-202ENST00000346436 COX7BP24311 80 aa8.05□□□□□ -1.12
CLCN6-202ENST00000346436 Q8N6K4 173 aa8.04□□□□□ -1.12
CLCN6-202ENST00000346436 EDN2P20800 178 aa8.04□□□□□ -1.12
CLCN6-202ENST00000346436 MP68P56378 58 aa8.04□□□□□ -1.12
CLCN6-202ENST00000346436 NRACQ8N912 160 aa8.04□□□□□ -1.12
CLCN6-202ENST00000346436 NEXN-AS1Q8NBZ9 246 aa8.04□□□□□ -1.12
CLCN6-202ENST00000346436 H0Y9J4 135 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 PRM2P04554 102 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 NREPQ16612 68 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 RS1O15537 224 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 ABCA2Q9BZC7 2435 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 A0A096LNJ9 63 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 IGLV1-40P01703 118 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 FAM19A5Q7Z5A7 132 aaPredicted RBP8.03□□□□□ -1.12
CLCN6-202ENST00000346436 CHCHD7Q9BUK0 85 aa8.03□□□□□ -1.12
CLCN6-202ENST00000346436 RBM3P98179 157 aaKnown RBP8.02□□□□□ -1.13
CLCN6-202ENST00000346436 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
CLCN6-202ENST00000346436 FOXI1Q12951 378 aa8.02□□□□□ -1.13
CLCN6-202ENST00000346436 TRBV6-8A0A0A6YYG3 113 aa8.02□□□□□ -1.13
CLCN6-202ENST00000346436 PROK1P58294 105 aa8.02□□□□□ -1.13
CLCN6-202ENST00000346436 VPS13AQ96RL7 3174 aa8.02□□□□□ -1.13
CLCN6-202ENST00000346436 TCL1BO95988 128 aa8.01□□□□□ -1.13
CLCN6-202ENST00000346436 SEC61GP60059 68 aa8.01□□□□□ -1.13
CLCN6-202ENST00000346436 CLEC2BQ92478 149 aa8.01□□□□□ -1.13
CLCN6-202ENST00000346436 IGLV1-51P01701 117 aa8.01□□□□□ -1.13
CLCN6-202ENST00000346436 C20orf203Q8NBC4 194 aa8.01□□□□□ -1.13
CLCN6-202ENST00000346436 DOPEY1Q5JWR5 2465 aa8.01□□□□□ -1.13
CLCN6-202ENST00000346436 A0A1W2PPR1 153 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 RPL28P46779 137 aaKnown RBP8□□□□□ -1.13
CLCN6-202ENST00000346436 PDE6GP18545 87 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 WWC2-AS2Q96NR7 200 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 MYO9AB2RTY4 2548 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 TINCRA0A1B0GVN0 87 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
CLCN6-202ENST00000346436 UBE2D2P62837 147 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 LINC01620Q4KN68 170 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 TEN1Q86WV5 123 aa8□□□□□ -1.13
CLCN6-202ENST00000346436 A0A1B0GX51 115 aa7.99□□□□□ -1.13
CLCN6-202ENST00000346436 SPANXB1Q9NS25 103 aaPredicted RBP7.99□□□□□ -1.13
CLCN6-202ENST00000346436 WDFY4Q6ZS81 3184 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms