RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
ZNF540-202ENST00000343599 F8W735 103 aaPredicted RBP5.34□□□□□ -1.55
ZNF540-202ENST00000343599 EGR2P11161 476 aaPredicted RBP5.34□□□□□ -1.55
ZNF540-202ENST00000343599 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.55
ZNF540-202ENST00000343599 DNAH10Q8IVF4 4471 aa5.34□□□□□ -1.55
ZNF540-202ENST00000343599 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.56
ZNF540-202ENST00000343599 LAGE3Q14657 143 aa5.34□□□□□ -1.56
ZNF540-202ENST00000343599 NSUN5P1Q3KNT7 163 aa5.34□□□□□ -1.56
ZNF540-202ENST00000343599 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.56
ZNF540-202ENST00000343599 RP1L1Q8IWN7 2480 aaPredicted RBP5.33□□□□□ -1.56
ZNF540-202ENST00000343599 HERVK_113P61574 105 aa5.33□□□□□ -1.56
ZNF540-202ENST00000343599 C1orf195Q5TG92 126 aa5.33□□□□□ -1.56
ZNF540-202ENST00000343599 ZNF826PQ6ZT77 177 aa5.33□□□□□ -1.56
ZNF540-202ENST00000343599 CNFNQ9BYD5 112 aa5.33□□□□□ -1.56
ZNF540-202ENST00000343599 DYNC1H1Q14204 4646 aaKnown RBP5.33□□□□□ -1.56
ZNF540-202ENST00000343599 COX8CQ7Z4L0 72 aa5.33□□□□□ -1.56
ZNF540-202ENST00000343599 PLCE1Q9P212 2302 aa5.33□□□□□ -1.56
ZNF540-202ENST00000343599 UPK2O00526 184 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 BLCAPP62952 87 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 SERP2Q8N6R1 65 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 ZNRF1Q8ND25 227 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 TMEM14CQ9P0S9 112 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 FAM236DA0A1B0GTK5 79 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 GAS8-AS1O95177 125 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 FAM236CP0DP71 79 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 Q9H8V8 135 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 MED12Q93074 2177 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 IGHV3-43A0A0B4J1X8 118 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 IGHV3-43DP0DP04 118 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 IGHV4-30-4P0DP06 118 aa5.32□□□□□ -1.56
ZNF540-202ENST00000343599 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
ZNF540-202ENST00000343599 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 MIFP14174 115 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 RPL39P5Q59GN2 51 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 TMEM223A0PJW6 202 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 TRIAP1O43715 76 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 RYR3Q15413 4870 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
ZNF540-202ENST00000343599 CSMD2Q7Z408 3487 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-202ENST00000343599 CCL3L1P16619 93 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 DCANP1Q8TF63 244 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 NDUFA4O00483 81 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 FAM201AQ5SY85 155 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 ZNF575Q86XF7 245 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 C20orf173Q96LM9 149 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 AMELXQ99217 191 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 LINC00467Q9BRT7 94 aa5.3□□□□□ -1.56
ZNF540-202ENST00000343599 TRAV12-2A0A075B6T6 113 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 SH2D1AO60880 128 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 NDUFC2O95298 119 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 NRACQ8N912 160 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 TMEM167AQ8TBQ9 72 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 CSMD1Q96PZ7 3565 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 IGLV2-23P01705 113 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 SUB1P53999 127 aaKnown RBP eCLIP5.29□□□□□ -1.56
ZNF540-202ENST00000343599 DEFB114Q30KQ6 69 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 LYPD1Q8N2G4 141 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
ZNF540-202ENST00000343599 KMT2AQ03164 3969 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 LST1O00453 97 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 NPC2P61916 151 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 Q6ZR54 194 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 C8orf49Q96NF6 230 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 NDUFA4L2Q9NRX3 87 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 VPS13CQ709C8 3753 aa5.29□□□□□ -1.56
ZNF540-202ENST00000343599 H3BTX0 84 aa5.28□□□□□ -1.56
ZNF540-202ENST00000343599 OVOL2Q9BRP0 275 aa5.28□□□□□ -1.56
ZNF540-202ENST00000343599 GATA1P15976 413 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-202ENST00000343599 ERCC8Q13216 396 aa5.28□□□□□ -1.56
ZNF540-202ENST00000343599 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-202ENST00000343599 FAM19A1Q7Z5A9 133 aa5.28□□□□□ -1.56
ZNF540-202ENST00000343599 ARHGAP32A7KAX9 2087 aa5.28□□□□□ -1.56
ZNF540-202ENST00000343599 TACC2O95359 2948 aa5.28□□□□□ -1.56
ZNF540-202ENST00000343599 COL6A5A8TX70 2615 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 ERHP84090 104 aaKnown RBP5.27□□□□□ -1.57
ZNF540-202ENST00000343599 C11orf45Q8TAV5 145 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 EEF1AKMT3Q96AZ1 226 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 SCGB3A1Q96QR1 104 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 MSRB1Q9NZV6 116 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 MRPL36Q9P0J6 103 aaKnown RBP5.27□□□□□ -1.57
ZNF540-202ENST00000343599 APLNQ9ULZ1 77 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 VPS13DQ5THJ4 4388 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 TRBV19A0A075B6N1 114 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 ICOSQ9Y6W8 199 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 LY6EQ16553 131 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 Q1RN00 199 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 VMA21Q3ZAQ7 101 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 ORMDL2Q53FV1 153 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 C14orf178Q8N769 122 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-202ENST00000343599 DAND5Q8N907 189 aa5.27□□□□□ -1.57
ZNF540-202ENST00000343599 IGLV4-69A0A075B6H9 119 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 TRAV10A0A0B4J240 114 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 H7C2G1 150 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 BUB3O43684 328 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 FHL2Q14192 279 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms