RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SUMO2P61956 95 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 Q8N976 141 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 OR10D4PQ8NGN7 298 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 PDZD11Q5EBL8 140 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 TCAPO15273 167 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 TSHBP01222 138 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 CKS2P33552 79 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 PYY3Q5JQD4 70 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 NTN5Q8WTR8 489 aaPredicted RBP8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
HLA-DQA1-201ENST00000343139 IGKV2D-24A0A075B6R9 120 aa8.68□□□□□ -1.02
HLA-DQA1-201ENST00000343139 C16orf90A8MZG2 172 aa8.68□□□□□ -1.02
HLA-DQA1-201ENST00000343139 SMKR1H3BMG3 65 aa8.68□□□□□ -1.02
HLA-DQA1-201ENST00000343139 ZNF25P17030 456 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQA1-201ENST00000343139 LINC00269Q8N2A0 174 aa8.68□□□□□ -1.02
HLA-DQA1-201ENST00000343139 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
HLA-DQA1-201ENST00000343139 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
HLA-DQA1-201ENST00000343139 TRAV8-4A0A0B4J246 113 aa8.67□□□□□ -1.02
HLA-DQA1-201ENST00000343139 REG3AQ06141 175 aa8.67□□□□□ -1.02
HLA-DQA1-201ENST00000343139 ORMDL3Q8N138 153 aa8.67□□□□□ -1.02
HLA-DQA1-201ENST00000343139 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
HLA-DQA1-201ENST00000343139 LAMTOR2Q9Y2Q5 125 aa8.67□□□□□ -1.02
HLA-DQA1-201ENST00000343139 IGLV4-60A0A075B6I1 120 aa8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 D6R8Y8 96 aa8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 BAGE3Q86Y29 109 aa8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 Q8N814 137 aa8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 MAPKAPK5-AS1Q8N8E1 139 aa8.66□□□□□ -1.02
HLA-DQA1-201ENST00000343139 PRSS47A8MTI9 375 aa8.65□□□□□ -1.02
HLA-DQA1-201ENST00000343139 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
HLA-DQA1-201ENST00000343139 DEFB104AQ8WTQ1 72 aa8.65□□□□□ -1.02
HLA-DQA1-201ENST00000343139 SERF1AO75920 110 aa8.65□□□□□ -1.03
HLA-DQA1-201ENST00000343139 FGF6P10767 208 aa8.65□□□□□ -1.03
HLA-DQA1-201ENST00000343139 FCER1GP30273 86 aa8.65□□□□□ -1.03
HLA-DQA1-201ENST00000343139 SMAGPQ0VAQ4 97 aa8.65□□□□□ -1.03
HLA-DQA1-201ENST00000343139 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.03
HLA-DQA1-201ENST00000343139 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 LINC00310P59036 64 aa8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 KRTAP26-1Q6PEX3 210 aa8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
HLA-DQA1-201ENST00000343139 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
HLA-DQA1-201ENST00000343139 NPYP01303 97 aa8.63□□□□□ -1.03
HLA-DQA1-201ENST00000343139 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
HLA-DQA1-201ENST00000343139 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
HLA-DQA1-201ENST00000343139 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
HLA-DQA1-201ENST00000343139 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
HLA-DQA1-201ENST00000343139 WFDC2Q14508 124 aa8.62□□□□□ -1.03
HLA-DQA1-201ENST00000343139 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
HLA-DQA1-201ENST00000343139 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
HLA-DQA1-201ENST00000343139 BAALCQ8WXS3 180 aa8.62□□□□□ -1.03
HLA-DQA1-201ENST00000343139 HERC2O95714 4834 aa8.62□□□□□ -1.03
HLA-DQA1-201ENST00000343139 KIAA1644Q3SXP7 199 aa8.61□□□□□ -1.03
HLA-DQA1-201ENST00000343139 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
HLA-DQA1-201ENST00000343139 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
HLA-DQA1-201ENST00000343139 NUPR1O60356 82 aa8.61□□□□□ -1.03
HLA-DQA1-201ENST00000343139 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
HLA-DQA1-201ENST00000343139 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
HLA-DQA1-201ENST00000343139 RYR1P21817 5038 aa8.6□□□□□ -1.03
HLA-DQA1-201ENST00000343139 IGLV5-52A0A0A0MRZ9 124 aa8.6□□□□□ -1.03
HLA-DQA1-201ENST00000343139 PCP4L1A6NKN8 68 aa8.6□□□□□ -1.03
HLA-DQA1-201ENST00000343139 K7EMI3 77 aa8.6□□□□□ -1.03
HLA-DQA1-201ENST00000343139 GCSHP23434 173 aa8.6□□□□□ -1.03
HLA-DQA1-201ENST00000343139 UBE2D4Q9Y2X8 147 aa8.6□□□□□ -1.03
HLA-DQA1-201ENST00000343139 ZNF664Q8N3J9 261 aa8.59□□□□□ -1.03
HLA-DQA1-201ENST00000343139 CHCHD1Q96BP2 118 aaKnown RBP8.59□□□□□ -1.03
HLA-DQA1-201ENST00000343139 MAP1LC3AQ9H492 121 aa8.59□□□□□ -1.03
HLA-DQA1-201ENST00000343139 LECT2O14960 151 aa8.58□□□□□ -1.04
HLA-DQA1-201ENST00000343139 CCL25O15444 150 aa8.58□□□□□ -1.04
HLA-DQA1-201ENST00000343139 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
HLA-DQA1-201ENST00000343139 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
HLA-DQA1-201ENST00000343139 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
HLA-DQA1-201ENST00000343139 HSBP1O75506 76 aa8.57□□□□□ -1.04
HLA-DQA1-201ENST00000343139 Q8N8P6 123 aa8.57□□□□□ -1.04
HLA-DQA1-201ENST00000343139 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
HLA-DQA1-201ENST00000343139 APOBP04114 4563 aaKnown RBP8.57□□□□□ -1.04
HLA-DQA1-201ENST00000343139 TSTD3H0UI37 97 aa8.56□□□□□ -1.04
HLA-DQA1-201ENST00000343139 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-201ENST00000343139 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
HLA-DQA1-201ENST00000343139 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-201ENST00000343139 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQA1-201ENST00000343139 HSPG2P98160 4391 aa8.55□□□□□ -1.04
HLA-DQA1-201ENST00000343139 FUSP35637 526 aaKnown RBP eCLIP8.55□□□□□ -1.04
HLA-DQA1-201ENST00000343139 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
HLA-DQA1-201ENST00000343139 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
HLA-DQA1-201ENST00000343139 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
HLA-DQA1-201ENST00000343139 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
HLA-DQA1-201ENST00000343139 GAGE12HA6NDE8 117 aa8.54□□□□□ -1.04
HLA-DQA1-201ENST00000343139 SCGB1D1O95968 90 aa8.54□□□□□ -1.04
HLA-DQA1-201ENST00000343139 SS18Q15532 418 aa8.54□□□□□ -1.04
HLA-DQA1-201ENST00000343139 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
HLA-DQA1-201ENST00000343139 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
HLA-DQA1-201ENST00000343139 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
HLA-DQA1-201ENST00000343139 PRSS1P07477 247 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms