RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
EGFR-202ENST00000342916 SPANXA1Q9NS26 97 aa13.3□□□□□ -0.28
EGFR-202ENST00000342916 LINC00694P0DN24 101 aa13.29□□□□□ -0.28
EGFR-202ENST00000342916 AMELXQ99217 191 aa13.29□□□□□ -0.28
EGFR-202ENST00000342916 VCX2Q9H322 139 aa13.29□□□□□ -0.28
EGFR-202ENST00000342916 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
EGFR-202ENST00000342916 RNASE13Q5GAN3 156 aaKnown RBP13.29□□□□□ -0.28
EGFR-202ENST00000342916 PRADC1Q9BSG0 188 aa13.29□□□□□ -0.28
EGFR-202ENST00000342916 DLEU1O43261 78 aa13.28□□□□□ -0.28
EGFR-202ENST00000342916 BATFQ16520 125 aa13.28□□□□□ -0.28
EGFR-202ENST00000342916 NPSP0C0P6 89 aa13.28□□□□□ -0.28
EGFR-202ENST00000342916 Q6ZUT4 128 aa13.28□□□□□ -0.28
EGFR-202ENST00000342916 PAPPA-AS1Q5QFB9 102 aa13.27□□□□□ -0.28
EGFR-202ENST00000342916 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
EGFR-202ENST00000342916 HINT1P49773 126 aaPredicted RBP13.27□□□□□ -0.29
EGFR-202ENST00000342916 NFE4Q86UQ8 179 aa13.27□□□□□ -0.29
EGFR-202ENST00000342916 CRYBA4P53673 196 aa13.26□□□□□ -0.29
EGFR-202ENST00000342916 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
EGFR-202ENST00000342916 CHAC1Q9BUX1 264 aa13.25□□□□□ -0.29
EGFR-202ENST00000342916 A0A0J9YXV3 536 aa13.25□□□□□ -0.29
EGFR-202ENST00000342916 MPV17L2Q567V2 206 aa13.25□□□□□ -0.29
EGFR-202ENST00000342916 MAPKAPK5-AS1Q8N8E1 139 aa13.25□□□□□ -0.29
EGFR-202ENST00000342916 TIMM21Q9BVV7 248 aa13.25□□□□□ -0.29
EGFR-202ENST00000342916 TRAV8-6A0A0B4J262 113 aa13.24□□□□□ -0.29
EGFR-202ENST00000342916 E9PLD3 99 aa13.24□□□□□ -0.29
EGFR-202ENST00000342916 DAD1P61803 113 aa13.24□□□□□ -0.29
EGFR-202ENST00000342916 PRO0255Q9UI72 69 aa13.24□□□□□ -0.29
EGFR-202ENST00000342916 GYPEP15421 78 aa13.23□□□□□ -0.29
EGFR-202ENST00000342916 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
EGFR-202ENST00000342916 MRPS36P82909 103 aaKnown RBP13.23□□□□□ -0.29
EGFR-202ENST00000342916 SIVA1O15304 175 aa13.22□□□□□ -0.29
EGFR-202ENST00000342916 TMEM243Q9BU79 118 aa13.22□□□□□ -0.29
EGFR-202ENST00000342916 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.29
EGFR-202ENST00000342916 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
EGFR-202ENST00000342916 ZNF25P17030 456 aaPredicted RBP13.21□□□□□ -0.29
EGFR-202ENST00000342916 TMEM97Q5BJF2 176 aa13.21□□□□□ -0.29
EGFR-202ENST00000342916 COL5A1-AS1Q5SY13 56 aa13.21□□□□□ -0.29
EGFR-202ENST00000342916 TRBV25-1A0A075B6N4 114 aa13.2□□□□□ -0.3
EGFR-202ENST00000342916 DGAT2L7PQ6IED9 249 aa13.2□□□□□ -0.3
EGFR-202ENST00000342916 C11orf68Q9H3H3 251 aaKnown RBP13.2□□□□□ -0.3
EGFR-202ENST00000342916 CSDC2Q9Y534 153 aaKnown RBP13.2□□□□□ -0.3
EGFR-202ENST00000342916 TRBV6-8A0A0A6YYG3 113 aa13.2□□□□□ -0.3
EGFR-202ENST00000342916 VSIG2Q96IQ7 327 aa13.2□□□□□ -0.3
EGFR-202ENST00000342916 PAX4O43316 350 aa13.19□□□□□ -0.3
EGFR-202ENST00000342916 BVES-AS1Q5T3Y7 98 aa13.19□□□□□ -0.3
EGFR-202ENST00000342916 ATP5G1P05496 136 aa13.19□□□□□ -0.3
EGFR-202ENST00000342916 A0A0J9YY99 117 aa13.18□□□□□ -0.3
EGFR-202ENST00000342916 UBE2D1P51668 147 aa13.18□□□□□ -0.3
EGFR-202ENST00000342916 HERVK_113P61574 105 aa13.18□□□□□ -0.3
EGFR-202ENST00000342916 ATP6V0E2Q8NHE4 81 aa13.18□□□□□ -0.3
EGFR-202ENST00000342916 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
EGFR-202ENST00000342916 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
EGFR-202ENST00000342916 CSMD3Q7Z407 3707 aa13.17□□□□□ -0.3
EGFR-202ENST00000342916 UBE2L6O14933 153 aa13.17□□□□□ -0.3
EGFR-202ENST00000342916 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
EGFR-202ENST00000342916 HIGD1BQ9P298 99 aa13.17□□□□□ -0.3
EGFR-202ENST00000342916 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
EGFR-202ENST00000342916 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
EGFR-202ENST00000342916 CDC42SE2Q9NRR3 84 aa13.16□□□□□ -0.3
EGFR-202ENST00000342916 A0A096LPF7 62 aa13.16□□□□□ -0.3
EGFR-202ENST00000342916 MYMXA0A1B0GTQ4 84 aa13.16□□□□□ -0.3
EGFR-202ENST00000342916 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
EGFR-202ENST00000342916 DNAH7Q8WXX0 4024 aa13.15□□□□□ -0.3
EGFR-202ENST00000342916 TRAV26-1A0A087WT03 109 aa13.15□□□□□ -0.3
EGFR-202ENST00000342916 H7C423 109 aa13.15□□□□□ -0.3
EGFR-202ENST00000342916 GAGE6Q13070 117 aa13.15□□□□□ -0.3
EGFR-202ENST00000342916 AMMECR1LQ6DCA0 310 aa13.15□□□□□ -0.3
EGFR-202ENST00000342916 F5H768 121 aa13.15□□□□□ -0.31
EGFR-202ENST00000342916 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.31
EGFR-202ENST00000342916 HTN3P15516 51 aa13.14□□□□□ -0.31
EGFR-202ENST00000342916 HSD52Q0P140 79 aa13.14□□□□□ -0.31
EGFR-202ENST00000342916 Q6ZTC4 211 aa13.14□□□□□ -0.31
EGFR-202ENST00000342916 ZNF815PA8K554 130 aa13.13□□□□□ -0.31
EGFR-202ENST00000342916 C11orf45Q8TAV5 145 aa13.13□□□□□ -0.31
EGFR-202ENST00000342916 CHCHD5Q9BSY4 110 aa13.13□□□□□ -0.31
EGFR-202ENST00000342916 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
EGFR-202ENST00000342916 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
EGFR-202ENST00000342916 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
EGFR-202ENST00000342916 J3QQQ9 107 aa13.12□□□□□ -0.31
EGFR-202ENST00000342916 TMEM101Q96IK0 257 aa13.12□□□□□ -0.31
EGFR-202ENST00000342916 IGLV4-60A0A075B6I1 120 aa13.11□□□□□ -0.31
EGFR-202ENST00000342916 COX6A2Q02221 97 aa13.11□□□□□ -0.31
EGFR-202ENST00000342916 LINC00242Q5T6M2 205 aa13.11□□□□□ -0.31
EGFR-202ENST00000342916 TRAV13-1A0A0B4J241 112 aa13.11□□□□□ -0.31
EGFR-202ENST00000342916 LEPROTO15243 131 aa13.11□□□□□ -0.31
EGFR-202ENST00000342916 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
EGFR-202ENST00000342916 GEMIN7Q9H840 131 aaKnown RBP13.11□□□□□ -0.31
EGFR-202ENST00000342916 IGLV5-45A0A087WSX0 123 aa13.1□□□□□ -0.31
EGFR-202ENST00000342916 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
EGFR-202ENST00000342916 TIRAPP58753 221 aa13.1□□□□□ -0.31
EGFR-202ENST00000342916 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
EGFR-202ENST00000342916 CDKN2A-AS1Q9UH64 79 aa13.1□□□□□ -0.31
EGFR-202ENST00000342916 IGHV3-30-3P0DP02 117 aa13.08□□□□□ -0.32
EGFR-202ENST00000342916 SPINK8P0C7L1 97 aa13.08□□□□□ -0.32
EGFR-202ENST00000342916 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
EGFR-202ENST00000342916 LGALS3P17931 250 aaKnown RBP13.07□□□□□ -0.32
EGFR-202ENST00000342916 Q6ZVH6 145 aa13.07□□□□□ -0.32
EGFR-202ENST00000342916 IGHV1-58A0A0C4DH39 117 aa13.06□□□□□ -0.32
EGFR-202ENST00000342916 K7EP13 123 aa13.06□□□□□ -0.32
EGFR-202ENST00000342916 HERVK_113P63121 156 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms