RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
PTPRR-202ENST00000342084 SCGB1A1P11684 91 aa5.24□□□□□ -1.57
PTPRR-202ENST00000342084 ZNF843Q8N446 348 aa5.24□□□□□ -1.57
PTPRR-202ENST00000342084 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
PTPRR-202ENST00000342084 SONP18583 2426 aaKnown RBP5.24□□□□□ -1.57
PTPRR-202ENST00000342084 TRGV1A0A0A0MS02 117 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 RS1O15537 224 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 MIAQ16674 131 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 DEFB113Q30KQ7 82 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 C1orf158Q8N1D5 194 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 Q8N2B8 174 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 CLEC2BQ92478 149 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
PTPRR-202ENST00000342084 SPANXA1Q9NS26 97 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-202ENST00000342084 LINC01620Q4KN68 170 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 NTN5Q8WTR8 489 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-202ENST00000342084 WFDC10AQ9H1F0 79 aa5.23□□□□□ -1.57
PTPRR-202ENST00000342084 APCP25054 2843 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 WNK1Q9H4A3 2382 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 CRYBA4P53673 196 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 BEAN1Q3B7T3 259 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 HIST2H2BCQ6DN03 193 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 DGAT2L7PQ6IED9 249 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 Q6ZTI0 123 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 KRTAP1-3Q8IUG1 177 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 STHQ8IWL8 128 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 TMEM101Q96IK0 257 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 SPANXDQ9BXN6 97 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 SPANXCQ9NY87 97 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 ICOSQ9Y6W8 199 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 SETXQ7Z333 2677 aaKnown RBP5.22□□□□□ -1.57
PTPRR-202ENST00000342084 ITPR3Q14573 2671 aa5.22□□□□□ -1.57
PTPRR-202ENST00000342084 TRAV13-1A0A0B4J241 112 aa5.21□□□□□ -1.57
PTPRR-202ENST00000342084 TEX49A0A1B0GTD5 131 aa5.21□□□□□ -1.57
PTPRR-202ENST00000342084 CKS1BP61024 79 aa5.21□□□□□ -1.57
PTPRR-202ENST00000342084 ATXN8Q156A1 80 aa5.21□□□□□ -1.57
PTPRR-202ENST00000342084 ZFAND6Q6FIF0 208 aa5.21□□□□□ -1.57
PTPRR-202ENST00000342084 SETD2Q9BYW2 2564 aaPredicted RBP5.21□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE12JA6NER3 117 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 DNAJC9-AS1A6NH13 148 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 PLA2G2AP14555 144 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 RPL13AP40429 203 aaKnown RBP5.21□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE4Q13068 117 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE5Q13069 117 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 NTM-AS1Q6ZSK4 140 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 DNAJC30Q96LL9 226 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
PTPRR-202ENST00000342084 LOC100131303A0A0U1RQF7 123 aa5.2□□□□□ -1.58
PTPRR-202ENST00000342084 LINC00242Q5T6M2 205 aa5.2□□□□□ -1.58
PTPRR-202ENST00000342084 LRRC75A-AS1Q8N1F1 130 aa5.2□□□□□ -1.58
PTPRR-202ENST00000342084 WFDC11Q8NEX6 87 aa5.2□□□□□ -1.58
PTPRR-202ENST00000342084 Q9H8V8 135 aa5.2□□□□□ -1.58
PTPRR-202ENST00000342084 NOP10Q9NPE3 64 aaKnown RBP5.2□□□□□ -1.58
PTPRR-202ENST00000342084 JMJD1CQ15652 2540 aa5.2□□□□□ -1.58
PTPRR-202ENST00000342084 TRBV30A0A0K0K1B3 111 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 PIK3CD-AS1Q5SR53 167 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 IL17DQ8TAD2 202 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 TRBV10-2A0A0K0K1G8 114 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 A0A1B0GV72 72 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 H7C423 109 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 K7EQD1 137 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 CCL24O00175 119 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 NDUFA1O15239 70 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 CIDEAO60543 219 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 RPL35AP18077 110 aaKnown RBP5.19□□□□□ -1.58
PTPRR-202ENST00000342084 SOSTDC1Q6X4U4 206 aa5.19□□□□□ -1.58
PTPRR-202ENST00000342084 CITED2Q99967 270 aaPredicted RBP5.19□□□□□ -1.58
PTPRR-202ENST00000342084 FLNAP21333 2647 aaKnown RBP5.18□□□□□ -1.58
PTPRR-202ENST00000342084 CCDC168Q8NDH2 2452 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 IGLV5-45A0A087WSX0 123 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 SMIM1B2RUZ4 78 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 CRLF1O75462 422 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE7O76087 117 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE12FP0CL80 117 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE12GP0CL81 117 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 GAGE12IP0CL82 117 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 TIRAPP58753 221 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 C2orf82Q6UX34 121 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 LINC00308Q8TCZ7 52 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 NOTCH3Q9UM47 2321 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 IGKV3OR2-268A0A0C4DH90 116 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 GIG44P09565 113 aaPredicted RBP5.18□□□□□ -1.58
PTPRR-202ENST00000342084 RPL36AP83881 106 aaKnown RBP5.18□□□□□ -1.58
PTPRR-202ENST00000342084 RPL36ALQ969Q0 106 aaKnown RBP5.18□□□□□ -1.58
PTPRR-202ENST00000342084 UBE2WQ96B02 151 aa5.18□□□□□ -1.58
PTPRR-202ENST00000342084 C2CD3Q4AC94 2353 aa5.17□□□□□ -1.58
PTPRR-202ENST00000342084 ANK3Q12955 4377 aaKnown RBP5.17□□□□□ -1.58
PTPRR-202ENST00000342084 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
PTPRR-202ENST00000342084 IGLV5-39A0A0G2JS06 123 aa5.17□□□□□ -1.58
PTPRR-202ENST00000342084 HERVK_113P63121 156 aa5.17□□□□□ -1.58
PTPRR-202ENST00000342084 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
PTPRR-202ENST00000342084 YAE1D1Q9NRH1 226 aa5.17□□□□□ -1.58
PTPRR-202ENST00000342084 TRAV4A0A0B4J268 109 aa5.16□□□□□ -1.58
PTPRR-202ENST00000342084 M0QXV9 152 aa5.16□□□□□ -1.58
PTPRR-202ENST00000342084 TIMM17BO60830 172 aa5.16□□□□□ -1.58
PTPRR-202ENST00000342084 PRIMA1Q86XR5 153 aa5.16□□□□□ -1.58
PTPRR-202ENST00000342084 C1orf43Q9BWL3 253 aa5.16□□□□□ -1.58
PTPRR-202ENST00000342084 CDC42SE2Q9NRR3 84 aa5.16□□□□□ -1.58
PTPRR-202ENST00000342084 TRAV26-1A0A087WT03 109 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms