RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 RPL35AP18077 110 aaKnown RBP10.75□□□□□ -0.69
TPM3-208ENST00000341485 WFDC2Q14508 124 aa10.75□□□□□ -0.69
TPM3-208ENST00000341485 C10orf126Q8N4M7 172 aa10.75□□□□□ -0.69
TPM3-208ENST00000341485 IGHV3-30-3P0DP02 117 aa10.75□□□□□ -0.69
TPM3-208ENST00000341485 PRO0461Q9UI25 63 aa10.75□□□□□ -0.69
TPM3-208ENST00000341485 TEX48A0A1B0GUV7 120 aa10.74□□□□□ -0.69
TPM3-208ENST00000341485 TINCRA0A1B0GVN0 87 aa10.74□□□□□ -0.69
TPM3-208ENST00000341485 RPL24P83731 157 aaKnown RBP10.74□□□□□ -0.69
TPM3-208ENST00000341485 TIMM21Q9BVV7 248 aa10.74□□□□□ -0.69
TPM3-208ENST00000341485 JMJD1CQ15652 2540 aa10.74□□□□□ -0.69
TPM3-208ENST00000341485 TRAV8-3A0A0A6YYJ7 113 aa10.73□□□□□ -0.69
TPM3-208ENST00000341485 GIG44P09565 113 aaPredicted RBP10.73□□□□□ -0.69
TPM3-208ENST00000341485 C21orf62-AS1Q17RA5 79 aa10.73□□□□□ -0.69
TPM3-208ENST00000341485 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
TPM3-208ENST00000341485 WFDC9Q8NEX5 89 aa10.73□□□□□ -0.69
TPM3-208ENST00000341485 Q6ZTI0 123 aa10.73□□□□□ -0.69
TPM3-208ENST00000341485 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
TPM3-208ENST00000341485 A0A0J9YXY3 114 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 UBE2D3P61077 147 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 UBE2D2P62837 147 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 SFTA2Q6UW10 78 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 TMEM263Q8WUH6 116 aaKnown RBP10.72□□□□□ -0.69
TPM3-208ENST00000341485 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
TPM3-208ENST00000341485 A4D1N5 150 aa10.71□□□□□ -0.69
TPM3-208ENST00000341485 EIF4EBP3O60516 100 aaPredicted RBP10.71□□□□□ -0.69
TPM3-208ENST00000341485 LOC107984156A0A0G2JMH3 177 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 ARL17AQ8IVW1 177 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 K7EQD1 137 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 SH2D6Q7Z4S9 175 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
TPM3-208ENST00000341485 LITAFQ99732 161 aa10.69□□□□□ -0.7
TPM3-208ENST00000341485 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
TPM3-208ENST00000341485 PRO1854Q9UHT4 67 aa10.69□□□□□ -0.7
TPM3-208ENST00000341485 A8MZ25 164 aa10.69□□□□□ -0.7
TPM3-208ENST00000341485 PSMB2P49721 201 aa10.69□□□□□ -0.7
TPM3-208ENST00000341485 NIPBLQ6KC79 2804 aaeCLIP10.68□□□□□ -0.76e-7■■■□□ 15
TPM3-208ENST00000341485 TRBV10-1A0A0K0K1A3 114 aa10.68□□□□□ -0.7
TPM3-208ENST00000341485 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
TPM3-208ENST00000341485 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
TPM3-208ENST00000341485 ETDBQ3ZM63 59 aa10.68□□□□□ -0.7
TPM3-208ENST00000341485 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
TPM3-208ENST00000341485 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
TPM3-208ENST00000341485 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
TPM3-208ENST00000341485 TEP1Q99973 2627 aaKnown RBP10.68□□□□□ -0.7
TPM3-208ENST00000341485 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
TPM3-208ENST00000341485 DAZ2Q13117 558 aaKnown RBP10.67□□□□□ -0.7
TPM3-208ENST00000341485 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
TPM3-208ENST00000341485 TIRAPP58753 221 aa10.67□□□□□ -0.7
TPM3-208ENST00000341485 DGAT2L7PQ6IED9 249 aa10.67□□□□□ -0.7
TPM3-208ENST00000341485 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
TPM3-208ENST00000341485 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
TPM3-208ENST00000341485 A0A0B4J2C4 111 aa10.66□□□□□ -0.7
TPM3-208ENST00000341485 WIPF1O43516 503 aa10.66□□□□□ -0.7
TPM3-208ENST00000341485 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
TPM3-208ENST00000341485 LYRM7Q5U5X0 104 aa10.66□□□□□ -0.7
TPM3-208ENST00000341485 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
TPM3-208ENST00000341485 ATRQ13535 2644 aa10.66□□□□□ -0.7
TPM3-208ENST00000341485 GAGE12JA6NER3 117 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 TCL1BO95988 128 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 IGHV3-33P01772 117 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 GAGE4Q13068 117 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 GAGE5Q13069 117 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
TPM3-208ENST00000341485 CSNK1G2-AS1Q8NCQ2 148 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
TPM3-208ENST00000341485 COX6A2Q02221 97 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 ADAMTSL4-AS1Q5T5F5 129 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 SBSPONQ8IVN8 264 aa10.65□□□□□ -0.7
TPM3-208ENST00000341485 ZFAND6Q6FIF0 208 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 GAGE7O76087 117 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 SPANXCQ9NY87 97 aa10.64□□□□□ -0.71
TPM3-208ENST00000341485 TENM1Q9UKZ4 2725 aa10.63□□□□□ -0.71
TPM3-208ENST00000341485 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.63□□□□□ -0.71
TPM3-208ENST00000341485 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
TPM3-208ENST00000341485 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
TPM3-208ENST00000341485 TRBV20-1A0A075B6N2 111 aa10.62□□□□□ -0.71
TPM3-208ENST00000341485 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
TPM3-208ENST00000341485 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
TPM3-208ENST00000341485 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
TPM3-208ENST00000341485 MIAQ16674 131 aa10.62□□□□□ -0.71
TPM3-208ENST00000341485 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
TPM3-208ENST00000341485 OVOL2Q9BRP0 275 aa10.62□□□□□ -0.71
TPM3-208ENST00000341485 TRGV2A0A075B6R0 118 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 SCGB1C2P0DMR2 95 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 HERVK_113P63121 156 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 NOTCH3Q9UM47 2321 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 H7C2G1 150 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 PRSS2P07478 247 aa10.61□□□□□ -0.71
TPM3-208ENST00000341485 APOC4P55056 127 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms