RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 EMP1P54849 157 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 FAM104BQ5XKR9 115 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 SVBPQ8N300 66 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 TMEM208Q9BTX3 173 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 MRPL16Q9NX20 251 aaKnown RBP2.37□□□□□ -2.03
CCDC66-202ENST00000341455 HHLA3Q9XRX5 114 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 TNXBP22105 4242 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 HIGD1CA8MV81 97 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 SNAPINO95295 136 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 PRSS2P07478 247 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 SNRPCP09234 159 aaKnown RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 ESDP10768 282 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 RAB4AP20338 218 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 SRIP30626 198 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 HBBP68871 147 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 LYPD5Q6UWN5 251 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 Q6ZRN7 208 aaPredicted RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 SLC25A29Q8N8R3 303 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 PRADC1Q9BSG0 188 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 PRR34Q9NV39 138 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 PHLDA3Q9Y5J5 127 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 FAT1Q14517 4588 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 TRBV7-3A0A075B6L6 115 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 TRGV1A0A0A0MS02 117 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 A0A1B0GWB2 263 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 F8W036 122 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 CCL25O15444 150 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 ERVFC1-1P60608 527 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 MUC21Q5SSG8 566 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 FAM19A1Q7Z5A9 133 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 NIT2Q9NQR4 276 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 ZNF25P17030 456 aaPredicted RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 NTF3P20783 257 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 MRPS36P82909 103 aaKnown RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 TTC32Q5I0X7 151 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 CBLN2Q8IUK8 224 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 PACRGQ96M98 296 aaPredicted RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 SAMD10Q9BYL1 202 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 LINC00588Q9Y4M8 146 aa2.36□□□□□ -2.03
CCDC66-202ENST00000341455 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
CCDC66-202ENST00000341455 C7orf77A4D0Y5 90 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 SMKR1H3BMG3 65 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 HLA-DQA1P01909 254 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 PRM2P04554 102 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 G0S2P27469 103 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 ELOBQ15370 118 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 C14orf178Q8N769 122 aaPredicted RBP2.35□□□□□ -2.03
CCDC66-202ENST00000341455 PYGO1Q9Y3Y4 419 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 WNK1Q9H4A3 2382 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 A0A1B0GV50 99 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 IBA57-AS1B1ANH7 110 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 ADIRFQ15847 76 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 ESRGQ1W209 222 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 NEGR1Q7Z3B1 354 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 AMN1Q8IY45 258 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 BORCS7Q96B45 105 aa2.35□□□□□ -2.03
CCDC66-202ENST00000341455 TRGV2A0A075B6R0 118 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 GRIFINA4D1Z8 144 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 EPM2AB3EWF7 344 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 RTL8CO15255 209 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 S100A4P26447 101 aaKnown RBP2.34□□□□□ -2.03
CCDC66-202ENST00000341455 MRPL51Q4U2R6 128 aaKnown RBP2.34□□□□□ -2.03
CCDC66-202ENST00000341455 SPANXN1Q5VSR9 72 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 C10orf126Q8N4M7 172 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 FAM104AQ969W3 186 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 PRAC1Q96KF2 57 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 IGHV3-38A0A0C4DH36 116 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 GZMBP10144 247 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 RPL36AP83881 106 aaKnown RBP2.34□□□□□ -2.03
CCDC66-202ENST00000341455 OR10J3Q5JRS4 329 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 NTM-AS1Q6ZSK4 140 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 ATP6V0E2Q8NHE4 81 aa2.34□□□□□ -2.03
CCDC66-202ENST00000341455 RPL36ALQ969Q0 106 aaKnown RBP2.34□□□□□ -2.03
CCDC66-202ENST00000341455 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 NBDYA0A0U1RRE5 68 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 E9PLD3 99 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 SMAGPQ0VAQ4 97 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 KIAA1644Q3SXP7 199 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 COA6Q5JTJ3 125 aaKnown RBP2.34□□□□□ -2.04
CCDC66-202ENST00000341455 SMIM15Q7Z3B0 74 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 NFE4Q86UQ8 179 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 NIT1Q86X76 327 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 Q8N8P6 123 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 TMEM70Q9BUB7 260 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 JPT2Q9H910 190 aa2.34□□□□□ -2.04
CCDC66-202ENST00000341455 NOTCH1P46531 2555 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 IGHV3OR16-12A0A075B7B8 117 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 IGHV1-24A0A0C4DH33 117 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 COLCA2A8K830 154 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 F5H768 121 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 I3L3M4 83 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 M0R036 132 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 DEFB4AO15263 64 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 EVI2AP22794 236 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 CCL18P55774 89 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms