RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CIDEAO60543 219 aa14.49□□□□□ -0.09
SPG7-202ENST00000341316 RNASE13Q5GAN3 156 aaKnown RBP14.49□□□□□ -0.09
SPG7-202ENST00000341316 MUSTN1Q8IVN3 82 aa14.49□□□□□ -0.09
SPG7-202ENST00000341316 SMR3AQ99954 134 aa14.49□□□□□ -0.09
SPG7-202ENST00000341316 TMEM263Q8WUH6 116 aaKnown RBP14.49□□□□□ -0.09
SPG7-202ENST00000341316 IGHV3-33P01772 117 aa14.48□□□□□ -0.09
SPG7-202ENST00000341316 IL17DQ8TAD2 202 aa14.48□□□□□ -0.09
SPG7-202ENST00000341316 H7C2G1 150 aa14.48□□□□□ -0.09
SPG7-202ENST00000341316 WFDC10AQ9H1F0 79 aa14.48□□□□□ -0.09
SPG7-202ENST00000341316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.46□□□□□ -0.09
SPG7-202ENST00000341316 IGKV2-29A2NJV5 120 aaPredicted RBP14.46□□□□□ -0.09
SPG7-202ENST00000341316 ANKRD29Q8N6D5 301 aa14.46□□□□□ -0.09
SPG7-202ENST00000341316 A0A1B0GV72 72 aa14.46□□□□□ -0.09
SPG7-202ENST00000341316 ADARB2-AS1A8MUL3 147 aa14.46□□□□□ -0.09
SPG7-202ENST00000341316 A0A0B4J2C4 111 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 A0A0J9YXY3 114 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 GIG44P09565 113 aaPredicted RBP14.45□□□□□ -0.1
SPG7-202ENST00000341316 ERG28Q9UKR5 140 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 UBE2D4Q9Y2X8 147 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 TRGV1A0A0A0MS02 117 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 MT-ATP8P03928 68 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 IGHV3-30-3P0DP02 117 aa14.45□□□□□ -0.1
SPG7-202ENST00000341316 HIVEP2P31629 2446 aa14.44□□□□□ -0.1
SPG7-202ENST00000341316 CRYBA4P53673 196 aa14.44□□□□□ -0.1
SPG7-202ENST00000341316 DNAJC30Q96LL9 226 aa14.44□□□□□ -0.1
SPG7-202ENST00000341316 SPINK8P0C7L1 97 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 XGP55808 180 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 MRPS36P82909 103 aaKnown RBP14.43□□□□□ -0.1
SPG7-202ENST00000341316 Q6ZUT4 128 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 TIMM21Q9BVV7 248 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 C9JAW5 83 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 SLC25A20O43772 301 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 HILS1P60008 231 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 CKS1BP61024 79 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 Q6ZTI0 123 aa14.43□□□□□ -0.1
SPG7-202ENST00000341316 TRAV8-3A0A0A6YYJ7 113 aa14.42□□□□□ -0.1
SPG7-202ENST00000341316 IGLV1-51P01701 117 aa14.42□□□□□ -0.1
SPG7-202ENST00000341316 C19orf73Q9NVV2 129 aa14.42□□□□□ -0.1
SPG7-202ENST00000341316 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.41□□□□□ -0.1
SPG7-202ENST00000341316 Q1RN00 199 aa14.41□□□□□ -0.1
SPG7-202ENST00000341316 SPANXA1Q9NS26 97 aa14.41□□□□□ -0.1
SPG7-202ENST00000341316 LITAFQ99732 161 aa14.4□□□□□ -0.1
SPG7-202ENST00000341316 RPL35AP18077 110 aaKnown RBP14.39□□□□□ -0.11
SPG7-202ENST00000341316 OTOGQ6ZRI0 2925 aa14.39□□□□□ -0.11
SPG7-202ENST00000341316 C2CD3Q4AC94 2353 aa14.38□□□□□ -0.11
SPG7-202ENST00000341316 NOP10Q9NPE3 64 aaKnown RBP14.38□□□□□ -0.11
SPG7-202ENST00000341316 IGHV1-58A0A0C4DH39 117 aa14.37□□□□□ -0.11
SPG7-202ENST00000341316 PLAC8L1A1L4L8 177 aa14.37□□□□□ -0.11
SPG7-202ENST00000341316 KRTAP10-3P60369 221 aa14.37□□□□□ -0.11
SPG7-202ENST00000341316 A8MZ25 164 aa14.36□□□□□ -0.11
SPG7-202ENST00000341316 PRSS2P07478 247 aa14.36□□□□□ -0.11
SPG7-202ENST00000341316 ADAMTSL4-AS1Q5T5F5 129 aa14.36□□□□□ -0.11
SPG7-202ENST00000341316 NDUFA12Q9UI09 145 aa14.36□□□□□ -0.11
SPG7-202ENST00000341316 TINCRA0A1B0GVN0 87 aa14.36□□□□□ -0.11
SPG7-202ENST00000341316 FN1P02751 2386 aaKnown RBP14.36□□□□□ -0.11
SPG7-202ENST00000341316 M0QXV9 152 aa14.35□□□□□ -0.11
SPG7-202ENST00000341316 NDUFA7O95182 113 aa14.35□□□□□ -0.11
SPG7-202ENST00000341316 ATXN8Q156A1 80 aa14.35□□□□□ -0.11
SPG7-202ENST00000341316 TRIAP1O43715 76 aa14.35□□□□□ -0.11
SPG7-202ENST00000341316 CMC4P56277 68 aaPredicted RBP14.35□□□□□ -0.11
SPG7-202ENST00000341316 LINC00694P0DN24 101 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 LINC01620Q4KN68 170 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 TRAV4A0A0B4J268 109 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 K7EQD1 137 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 CSNK1G2-AS1Q8NCQ2 148 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 VSIG2Q96IQ7 327 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 FAM110AQ9BQ89 295 aa14.34□□□□□ -0.11
SPG7-202ENST00000341316 VWFP04275 2813 aa14.33□□□□□ -0.12
SPG7-202ENST00000341316 TRBV30A0A0K0K1B3 111 aa14.33□□□□□ -0.12
SPG7-202ENST00000341316 NTM-AS1Q6ZSK4 140 aa14.33□□□□□ -0.12
SPG7-202ENST00000341316 SPANXDQ9BXN6 97 aa14.33□□□□□ -0.12
SPG7-202ENST00000341316 GEMIN7Q9H840 131 aaKnown RBP14.33□□□□□ -0.12
SPG7-202ENST00000341316 SPANXCQ9NY87 97 aa14.33□□□□□ -0.12
SPG7-202ENST00000341316 NPC2P61916 151 aa14.32□□□□□ -0.12
SPG7-202ENST00000341316 DAZ2Q13117 558 aaKnown RBP14.32□□□□□ -0.12
SPG7-202ENST00000341316 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.32□□□□□ -0.12
SPG7-202ENST00000341316 NTN5Q8WTR8 489 aaPredicted RBP14.32□□□□□ -0.12
SPG7-202ENST00000341316 TMEM262E9PQX1 116 aa14.31□□□□□ -0.12
SPG7-202ENST00000341316 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
SPG7-202ENST00000341316 RPL36AP83881 106 aaKnown RBP14.31□□□□□ -0.12
SPG7-202ENST00000341316 GAGE4Q13068 117 aa14.31□□□□□ -0.12
SPG7-202ENST00000341316 GAGE5Q13069 117 aa14.31□□□□□ -0.12
SPG7-202ENST00000341316 MIAQ16674 131 aa14.31□□□□□ -0.12
SPG7-202ENST00000341316 RPL36ALQ969Q0 106 aaKnown RBP14.31□□□□□ -0.12
SPG7-202ENST00000341316 TRBV10-1A0A0K0K1A3 114 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 GAGE7O76087 117 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 GAGE12FP0CL80 117 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 GAGE12GP0CL81 117 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 GAGE12IP0CL82 117 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 C16orf74Q96GX8 76 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 LY6G6DO95868 133 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 CDKN2A-AS1Q9UH64 79 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 ICOSQ9Y6W8 199 aa14.3□□□□□ -0.12
SPG7-202ENST00000341316 COX6A2Q02221 97 aa14.29□□□□□ -0.12
SPG7-202ENST00000341316 DGAT2L7PQ6IED9 249 aa14.29□□□□□ -0.12
SPG7-202ENST00000341316 TRBV10-2A0A0K0K1G8 114 aa14.27□□□□□ -0.12
SPG7-202ENST00000341316 LOC100131303A0A0U1RQF7 123 aa14.27□□□□□ -0.12
SPG7-202ENST00000341316 ZFAND6Q6FIF0 208 aa14.27□□□□□ -0.12
SPG7-202ENST00000341316 DAZ4Q86SG3 579 aaKnown RBP14.27□□□□□ -0.13
SPG7-202ENST00000341316 DAZ3Q9NR90 486 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms