RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 IGHV4-4A0A075B6R2 117 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 DKK1O94907 266 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 PRB3Q04118 309 aaPredicted RBP2.51□□□□□ -2.01
CSMD3-202ENST00000339701 LINC00526Q96FQ7 95 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 CYP4F30PQ9H0H9 118 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1D-13A0A0B4J2D9 117 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1-13P0DP09 117 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 SCRT1Q9BWW7 348 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 NOP10Q9NPE3 64 aaKnown RBP2.51□□□□□ -2.01
CSMD3-202ENST00000339701 CRYBA2P53672 197 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 ANKRD39Q53RE8 183 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 Q8N976 141 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 TP53TG3Q9ULZ0 132 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 FLNBO75369 2602 aaKnown RBP2.51□□□□□ -2.01
CSMD3-202ENST00000339701 FAM215AQ9Y5M1 114 aa2.51□□□□□ -2.01
CSMD3-202ENST00000339701 DEFB136Q30KP8 78 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 TNFRSF13BO14836 293 aaPredicted RBP2.5□□□□□ -2.01
CSMD3-202ENST00000339701 COX8CQ7Z4L0 72 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 SMR3AQ99954 134 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 A0A0J9YY99 117 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 RPL28P46779 137 aaKnown RBP2.5□□□□□ -2.01
CSMD3-202ENST00000339701 RPL37AP61513 92 aaKnown RBP2.5□□□□□ -2.01
CSMD3-202ENST00000339701 A6NED7 52 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 K7EIM0 57 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV3-48P01763 117 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 C1orf158Q8N1D5 194 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 RNASE8Q8TDE3 154 aaKnown RBP2.5□□□□□ -2.01
CSMD3-202ENST00000339701 IGLV11-55A0A075B6I3 123 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV3D-20A0A0C4DH25 116 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 ZNF80P51504 273 aaPredicted RBP2.5□□□□□ -2.01
CSMD3-202ENST00000339701 C20orf197Q8N268 126 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 EXOC3-AS1Q8N2X6 119 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 NDPQ00604 133 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 C14orf132Q9NPU4 83 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 LYPD2Q6UXB3 125 aa2.5□□□□□ -2.01
CSMD3-202ENST00000339701 GCN1Q92616 2671 aaKnown RBP2.5□□□□□ -2.01
CSMD3-202ENST00000339701 LST1O00453 97 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 CRYGAP11844 174 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 B3GALT5-AS1P59052 145 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 ZNRF2Q8NHG8 242 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 LINC00336Q6ZUF6 198 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 Q8N2B8 174 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 ZNRD1Q9P1U0 126 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 Q8N7P7 452 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 OXLD1Q5BKU9 147 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 HECTD1Q9ULT8 2610 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 KLK9Q2XQG4 91 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 MGAM2Q2M2H8 2515 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 SPINK13Q1W4C9 94 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 GAFA1Q96PS6 74 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 PROK2Q9HC23 129 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 TMEM254Q8TBM7 123 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 SPAG11BQ08648 103 aa2.49□□□□□ -2.01
CSMD3-202ENST00000339701 ATRAIDQ6UW56 229 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 SRCAPQ6ZRS2 3230 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 CENPEQ02224 2701 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1D-17A0A075B6S4 117 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 A0A096LPF7 62 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV3-73A0A0B4J1V6 119 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 LECT2O14960 151 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 C1orf147Q96MC9 270 aaPredicted RBP2.48□□□□□ -2.01
CSMD3-202ENST00000339701 LYPD5Q6UWN5 251 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 Q8IZM0 81 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 LINC00473A8K010 186 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1D-43A0A0B4J1Z2 117 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 A0A1W2PNU3 283 aaPredicted RBP2.48□□□□□ -2.01
CSMD3-202ENST00000339701 PLAC8L1A1L4L8 177 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 C19orf71A6NCJ1 209 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1-39P01597 117 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1D-39P04432 117 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 DKK2Q9UBU2 259 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 U3KQE9 123 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1-27A0A075B6S5 117 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 C15orf65H3BRN8 121 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 WT1-ASQ06250 92 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 HELZ2Q9BYK8 2649 aaKnown RBP2.48□□□□□ -2.01
CSMD3-202ENST00000339701 E7EUB6 86 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 C19orf84I3L1E1 186 aa2.48□□□□□ -2.01
CSMD3-202ENST00000339701 ATRQ13535 2644 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 A0A1B0GUV1 79 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 M0R378 163 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV2-40A0A087WW87 121 aaPredicted RBP2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV2D-40P01614 121 aaPredicted RBP2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV3-30-3P0DP02 117 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 ELOF1P60002 83 aaKnown RBP2.47□□□□□ -2.01
CSMD3-202ENST00000339701 SELENOKQ9Y6D0 94 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 CRIP2P52943 208 aaPredicted RBP2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGKV1-12A0A0C4DH73 117 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 A0A0J9YWU9 116 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 EGFEM1PQ0D2K5 195 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 PRYO14603 147 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 EBI3Q14213 229 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 LINC01006Q8NI28 216 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 WI2-2373I1.2A0A1W2PRP0 233 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 C2orf70A6NJV1 201 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV3-30P01768 117 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 IGHV3-33P01772 117 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms