RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 FAM222AQ5U5X8 452 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 SAA4P35542 130 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 ZFAND2AQ8N6M9 145 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 CCL17Q92583 94 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 Q9H8V8 135 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 IGF2RP11717 2491 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 UNQ9165/PRO28630Q6UXU0 137 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 C20orf203Q8NBC4 194 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 FAM104AQ969W3 186 aa7.01□□□□□ -1.29
PTCHD4-201ENST00000339488 IGLV11-55A0A075B6I3 123 aa7□□□□□ -1.29
PTCHD4-201ENST00000339488 SPTA1P02549 2419 aa7□□□□□ -1.29
PTCHD4-201ENST00000339488 IGHV3-73A0A0B4J1V6 119 aa7□□□□□ -1.29
PTCHD4-201ENST00000339488 C15orf32Q32M92 178 aa7□□□□□ -1.29
PTCHD4-201ENST00000339488 DCHS2Q6V1P9 2916 aa7□□□□□ -1.29
PTCHD4-201ENST00000339488 AKAP6Q13023 2319 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 A0A1W2PNU3 283 aaPredicted RBP6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 LECT2O14960 151 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 MIR7-3HGQ8N6C7 128 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 PPP1R17O96001 155 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 C9orf106Q8NAJ2 232 aa6.99□□□□□ -1.29
PTCHD4-201ENST00000339488 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 IGLV1-44P01699 117 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 TMEM30BQ3MIR4 351 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 IGHV4OR15-8A0A075B7B6 117 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 A0A087WW49 117 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 SOCS3O14543 225 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 CACNA1GO43497 2377 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 LRBAP50851 2863 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 IGKV2-29A2NJV5 120 aaPredicted RBP6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 A8MU10 97 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 NDUFB3O43676 98 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 RNASE1P07998 156 aaKnown RBP6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 Q6ZTI0 123 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 Q9UF83 564 aa6.98□□□□□ -1.29
PTCHD4-201ENST00000339488 IGHV1OR15-1A0A075B7D0 117 aa6.97□□□□□ -1.29
PTCHD4-201ENST00000339488 MRPS36P82909 103 aaKnown RBP6.97□□□□□ -1.29
PTCHD4-201ENST00000339488 C22orf34Q6ZV56 151 aa6.97□□□□□ -1.29
PTCHD4-201ENST00000339488 LY6G5BQ8NDX9 201 aa6.97□□□□□ -1.29
PTCHD4-201ENST00000339488 CLEC19AQ6UXS0 136 aa6.96□□□□□ -1.29
PTCHD4-201ENST00000339488 ANKRD11Q6UB99 2663 aaPredicted RBP6.96□□□□□ -1.3
PTCHD4-201ENST00000339488 ACACAQ13085 2346 aa6.96□□□□□ -1.3
PTCHD4-201ENST00000339488 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.3
PTCHD4-201ENST00000339488 C2CD3Q4AC94 2353 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 M0QY20 66 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 PROK1P58294 105 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 BLCAPP62952 87 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 KLKP1Q107X0 134 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 ATP1A1-AS1Q5TC04 95 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 TM2D3Q9BRN9 247 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 COX6A2Q02221 97 aa6.95□□□□□ -1.3
PTCHD4-201ENST00000339488 IGLV3-9A0A075B6K5 115 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 ECSCRQ19T08 205 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 FAM110DQ8TAY7 271 aaPredicted RBP6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 ITLN2Q8WWU7 325 aaPredicted RBP6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 IGLV1-47P01700 117 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 C6orf223Q8N319 242 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 SMIM11BQ8TCY0 68 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 NDUFA1O15239 70 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
PTCHD4-201ENST00000339488 DAD1P61803 113 aa6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 RPL36AP83881 106 aaKnown RBP6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 HIST2H2BCQ6DN03 193 aa6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 HIST2H2BDQ6DRA6 164 aa6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 RPL36ALQ969Q0 106 aaKnown RBP6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 CRPP02741 224 aa6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 C11orf45Q8TAV5 145 aa6.93□□□□□ -1.3
PTCHD4-201ENST00000339488 COL6A6A6NMZ7 2263 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 LYNX1G3V0Z9 82 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 PSPHP1O15172 72 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 PRB2P02812 416 aaPredicted RBP6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 LYNX1P0DP58 116 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 CD164Q04900 197 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 M0R2N4 97 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 HAMPP81172 84 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 MRPL53Q96EL3 112 aaKnown RBP6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 PIEZO2Q9H5I5 2752 aa6.92□□□□□ -1.3
PTCHD4-201ENST00000339488 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
PTCHD4-201ENST00000339488 GRNP28799 593 aaKnown RBP6.91□□□□□ -1.3
PTCHD4-201ENST00000339488 IGKV2-28A0A075B6P5 120 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 TRAV13-2A0A0B4J235 113 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 TRBV6-5A0A0K0K1A5 114 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 IGKV2D-28P01615 120 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 IGFL3Q6UXB1 125 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 PRR15Q8IV56 129 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 BSNQ9UPA5 3926 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 PLAC8L1A1L4L8 177 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 C19orf84I3L1E1 186 aa6.9□□□□□ -1.3
PTCHD4-201ENST00000339488 MIFP14174 115 aa6.9□□□□□ -1.31
PTCHD4-201ENST00000339488 HTN1P15515 57 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms