RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 WFDC2Q14508 124 aa8.51□□□□□ -1.05
SRSF3-201ENST00000339436 CBLN2Q8IUK8 224 aa8.51□□□□□ -1.05
SRSF3-201ENST00000339436 Q8N8P6 123 aa8.51□□□□□ -1.05
SRSF3-201ENST00000339436 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
SRSF3-201ENST00000339436 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
SRSF3-201ENST00000339436 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
SRSF3-201ENST00000339436 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
SRSF3-201ENST00000339436 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
SRSF3-201ENST00000339436 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
SRSF3-201ENST00000339436 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
SRSF3-201ENST00000339436 KRTAP26-1Q6PEX3 210 aa8.5□□□□□ -1.05
SRSF3-201ENST00000339436 TMEM18Q96B42 140 aa8.5□□□□□ -1.05
SRSF3-201ENST00000339436 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
SRSF3-201ENST00000339436 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
SRSF3-201ENST00000339436 CSDC2Q9Y534 153 aaKnown RBP8.5□□□□□ -1.05
SRSF3-201ENST00000339436 APOBP04114 4563 aaKnown RBP8.5□□□□□ -1.05
SRSF3-201ENST00000339436 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
SRSF3-201ENST00000339436 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 K7EMI3 77 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 LECT2O14960 151 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 Q8N814 137 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 BAALCQ8WXS3 180 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 TRAPPC1Q9Y5R8 145 aa8.49□□□□□ -1.05
SRSF3-201ENST00000339436 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
SRSF3-201ENST00000339436 IFI27P40305 119 aaPredicted RBP8.48□□□□□ -1.05
SRSF3-201ENST00000339436 CDPF1Q6NVV7 123 aa8.48□□□□□ -1.05
SRSF3-201ENST00000339436 Q6ZUT4 128 aa8.48□□□□□ -1.05
SRSF3-201ENST00000339436 ZNF664Q8N3J9 261 aa8.48□□□□□ -1.05
SRSF3-201ENST00000339436 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
SRSF3-201ENST00000339436 ORMDL2Q53FV1 153 aa8.47□□□□□ -1.05
SRSF3-201ENST00000339436 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.05
SRSF3-201ENST00000339436 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.05
SRSF3-201ENST00000339436 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.05
SRSF3-201ENST00000339436 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.05
SRSF3-201ENST00000339436 LINC00959A0A1B0GUT2 108 aa8.45□□□□□ -1.06
SRSF3-201ENST00000339436 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
SRSF3-201ENST00000339436 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
SRSF3-201ENST00000339436 RYR1P21817 5038 aa8.45□□□□□ -1.06
SRSF3-201ENST00000339436 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 MRPS36P82909 103 aaKnown RBP8.44□□□□□ -1.06
SRSF3-201ENST00000339436 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 PRSS3P2Q8NHM4 247 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 CYSLTR1Q9Y271 337 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 HSPG2P98160 4391 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 GAGE12HA6NDE8 117 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 C14orf177Q52M58 125 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 C18orf32Q8TCD1 76 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
SRSF3-201ENST00000339436 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
SRSF3-201ENST00000339436 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
SRSF3-201ENST00000339436 IGLV5-52A0A0A0MRZ9 124 aa8.43□□□□□ -1.06
SRSF3-201ENST00000339436 XCL1P47992 114 aa8.43□□□□□ -1.06
SRSF3-201ENST00000339436 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
SRSF3-201ENST00000339436 HERC2O95714 4834 aa8.42□□□□□ -1.06
SRSF3-201ENST00000339436 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
SRSF3-201ENST00000339436 CCL25O15444 150 aa8.42□□□□□ -1.06
SRSF3-201ENST00000339436 FOXI1Q12951 378 aa8.42□□□□□ -1.06
SRSF3-201ENST00000339436 SS18Q15532 418 aa8.42□□□□□ -1.06
SRSF3-201ENST00000339436 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
SRSF3-201ENST00000339436 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
SRSF3-201ENST00000339436 C1orf196B1AJZ1 125 aa8.41□□□□□ -1.06
SRSF3-201ENST00000339436 G0S2P27469 103 aa8.41□□□□□ -1.06
SRSF3-201ENST00000339436 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
SRSF3-201ENST00000339436 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 NPSP0C0P6 89 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 CD164L2Q6UWJ8 174 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 TOMM6Q96B49 74 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
SRSF3-201ENST00000339436 SCO1O75880 301 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 PRSS1P07477 247 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 COLCA2A8K830 154 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 GCSHP23434 173 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 Q6ZN92 141 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
SRSF3-201ENST00000339436 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
SRSF3-201ENST00000339436 TRGC2P03986 189 aa8.38□□□□□ -1.07
SRSF3-201ENST00000339436 CFAP161Q6P656 301 aa8.38□□□□□ -1.07
SRSF3-201ENST00000339436 GVQW2A0A096LPI5 108 aaPredicted RBP8.37□□□□□ -1.07
SRSF3-201ENST00000339436 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
SRSF3-201ENST00000339436 LINC00614P0C842 121 aa8.37□□□□□ -1.07
SRSF3-201ENST00000339436 ERASQ7Z444 233 aa8.37□□□□□ -1.07
SRSF3-201ENST00000339436 AMELXQ99217 191 aa8.37□□□□□ -1.07
SRSF3-201ENST00000339436 C2orf88Q9BSF0 95 aa8.37□□□□□ -1.07
SRSF3-201ENST00000339436 A0A096LNJ9 63 aa8.36□□□□□ -1.07
SRSF3-201ENST00000339436 COX7A2LO14548 114 aa8.36□□□□□ -1.07
SRSF3-201ENST00000339436 RAB5BP61020 215 aa8.36□□□□□ -1.07
SRSF3-201ENST00000339436 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
SRSF3-201ENST00000339436 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
SRSF3-201ENST00000339436 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms