RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 CFHR3Q02985 330 aa6.57□□□□□ -1.36
FOXR2-201ENST00000339140 LY6EQ16553 131 aa6.57□□□□□ -1.36
FOXR2-201ENST00000339140 Q9H8V8 135 aa6.57□□□□□ -1.36
FOXR2-201ENST00000339140 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.56□□□□□ -1.36
FOXR2-201ENST00000339140 IGHV3OR16-10A0A075B7F0 116 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 IGHV3-73A0A0B4J1V6 119 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 IGKV2-29A2NJV5 120 aaPredicted RBP6.56□□□□□ -1.36
FOXR2-201ENST00000339140 TMEM89A2RUT3 159 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 CRYGAP11844 174 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
FOXR2-201ENST00000339140 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 FAM19A3Q7Z5A8 133 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 LINC00467Q9BRT7 94 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
FOXR2-201ENST00000339140 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 AKAP6Q13023 2319 aa6.56□□□□□ -1.36
FOXR2-201ENST00000339140 IGHV3-53P01767 116 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 EDN2P20800 178 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 PSMB8P28062 276 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 HIST1H4AP62805 103 aaKnown RBP6.55□□□□□ -1.36
FOXR2-201ENST00000339140 BLCAPP62952 87 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 HIST2H2BCQ6DN03 193 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 HIST2H2BDQ6DRA6 164 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 C3orf56Q8N813 242 aa6.55□□□□□ -1.36
FOXR2-201ENST00000339140 DOPEY2Q9Y3R5 2298 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 PROK1P58294 105 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
FOXR2-201ENST00000339140 GAGE2AQ6NT46 116 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 CCL19Q99731 98 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 NACAE9PAV3 2078 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 USP9YO00507 2555 aaPredicted RBP6.54□□□□□ -1.36
FOXR2-201ENST00000339140 COL12A1Q99715 3063 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 DNAL4O96015 105 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 MALP21145 153 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 RPL28P46779 137 aaKnown RBP6.54□□□□□ -1.36
FOXR2-201ENST00000339140 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 PRIMA1Q86XR5 153 aa6.54□□□□□ -1.36
FOXR2-201ENST00000339140 ASH1LQ9NR48 2969 aaKnown RBP6.54□□□□□ -1.36
FOXR2-201ENST00000339140 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
FOXR2-201ENST00000339140 UTP20O75691 2785 aaKnown RBP6.54□□□□□ -1.36
FOXR2-201ENST00000339140 A8MTW9 85 aa6.53□□□□□ -1.36
FOXR2-201ENST00000339140 HTN1P15515 57 aa6.53□□□□□ -1.36
FOXR2-201ENST00000339140 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
FOXR2-201ENST00000339140 PIMREGQ9BSJ6 248 aa6.53□□□□□ -1.36
FOXR2-201ENST00000339140 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 CRPP02741 224 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 Q8N2B8 174 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 OR13C6PQ8NH95 151 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
FOXR2-201ENST00000339140 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 RBMY1A1P0DJD3 496 aaKnown RBP6.52□□□□□ -1.37
FOXR2-201ENST00000339140 RBMY1CP0DJD4 496 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 IGHV4-38-2P0DP08 117 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 COX6A2Q02221 97 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 RPL18AQ02543 176 aaKnown RBP6.52□□□□□ -1.37
FOXR2-201ENST00000339140 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.37
FOXR2-201ENST00000339140 SOSTDC1Q6X4U4 206 aa6.52□□□□□ -1.37
FOXR2-201ENST00000339140 GCN1Q92616 2671 aaKnown RBP6.51□□□□□ -1.37
FOXR2-201ENST00000339140 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
FOXR2-201ENST00000339140 KNCNA6PVL3 124 aa6.51□□□□□ -1.37
FOXR2-201ENST00000339140 H0YGX0 51 aa6.51□□□□□ -1.37
FOXR2-201ENST00000339140 TMEM258P61165 79 aa6.51□□□□□ -1.37
FOXR2-201ENST00000339140 Q6JHZ5 121 aa6.51□□□□□ -1.37
FOXR2-201ENST00000339140 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.51□□□□□ -1.37
FOXR2-201ENST00000339140 SPG11Q96JI7 2443 aa6.51□□□□□ -1.37
FOXR2-201ENST00000339140 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
FOXR2-201ENST00000339140 IGHV3-38A0A0C4DH36 116 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 RS1O15537 224 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 SYNJ2BPP57105 145 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 Q6ZSN1 163 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 SMIM9A6NGZ8 99 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 ATP5J2P56134 94 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 FAM218AQ96MZ4 157 aa6.5□□□□□ -1.37
FOXR2-201ENST00000339140 TRBV10-1A0A0K0K1A3 114 aa6.49□□□□□ -1.37
FOXR2-201ENST00000339140 DSCR9P59020 149 aa6.49□□□□□ -1.37
FOXR2-201ENST00000339140 FAM19A5Q7Z5A7 132 aaPredicted RBP6.49□□□□□ -1.37
FOXR2-201ENST00000339140 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
FOXR2-201ENST00000339140 C10orf105Q8TEF2 133 aa6.49□□□□□ -1.37
FOXR2-201ENST00000339140 MAST4O15021 2626 aa6.49□□□□□ -1.37
FOXR2-201ENST00000339140 DEFB131AP59861 70 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 RPL36AP83881 106 aaKnown RBP6.48□□□□□ -1.37
FOXR2-201ENST00000339140 RPL36ALQ969Q0 106 aaKnown RBP6.48□□□□□ -1.37
FOXR2-201ENST00000339140 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 Q9UF83 564 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 CRYBG3Q68DQ2 2970 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
FOXR2-201ENST00000339140 FLNBO75369 2602 aaKnown RBP6.48□□□□□ -1.37
FOXR2-201ENST00000339140 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 IGHV4-61A0A0C4DH41 118 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 F5H768 121 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 KRTAP10-9P60411 292 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 Q9HAA7 133 aa6.48□□□□□ -1.37
FOXR2-201ENST00000339140 KLK5Q9Y337 293 aaPredicted RBP6.48□□□□□ -1.37
FOXR2-201ENST00000339140 ABCA2Q9BZC7 2435 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms