RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 J3QQQ9 107 aa11.5□□□□□ -0.57
SCNN1A-202ENST00000338748 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
SCNN1A-202ENST00000338748 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
SCNN1A-202ENST00000338748 DEFB130BP0DP73 79 aa11.5□□□□□ -0.57
SCNN1A-202ENST00000338748 DEFB130AP0DP74 79 aa11.5□□□□□ -0.57
SCNN1A-202ENST00000338748 FHL2Q14192 279 aa11.5□□□□□ -0.57
SCNN1A-202ENST00000338748 TRGV4A0A0C4DH28 118 aa11.49□□□□□ -0.57
SCNN1A-202ENST00000338748 H3BUT2 72 aa11.49□□□□□ -0.57
SCNN1A-202ENST00000338748 CRYBA4P53673 196 aa11.49□□□□□ -0.57
SCNN1A-202ENST00000338748 DAZ4Q86SG3 579 aaKnown RBP11.49□□□□□ -0.57
SCNN1A-202ENST00000338748 DAZ3Q9NR90 486 aaKnown RBP11.49□□□□□ -0.57
SCNN1A-202ENST00000338748 DEFB135Q30KP9 77 aa11.48□□□□□ -0.57
SCNN1A-202ENST00000338748 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
SCNN1A-202ENST00000338748 A0A0J9YY99 117 aa11.48□□□□□ -0.57
SCNN1A-202ENST00000338748 TRBV6-4A0A1B0GX49 114 aa11.48□□□□□ -0.57
SCNN1A-202ENST00000338748 TAL2Q16559 108 aa11.48□□□□□ -0.57
SCNN1A-202ENST00000338748 SBSPONQ8IVN8 264 aa11.48□□□□□ -0.57
SCNN1A-202ENST00000338748 MAST4O15021 2626 aa11.47□□□□□ -0.57
SCNN1A-202ENST00000338748 SMIM13P0DJ93 91 aa11.47□□□□□ -0.57
SCNN1A-202ENST00000338748 UBE2D1P51668 147 aa11.47□□□□□ -0.57
SCNN1A-202ENST00000338748 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
SCNN1A-202ENST00000338748 LEPROTO15243 131 aa11.46□□□□□ -0.57
SCNN1A-202ENST00000338748 DEFB4AO15263 64 aa11.46□□□□□ -0.57
SCNN1A-202ENST00000338748 LINC00612Q8N6U2 182 aa11.46□□□□□ -0.57
SCNN1A-202ENST00000338748 BAHCC1Q9P281 2608 aa11.46□□□□□ -0.58
SCNN1A-202ENST00000338748 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 A8MZ25 164 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 IGHV3-30-3P0DP02 117 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 KIR2DL5BQ8NHK3 375 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 TIMM21Q9BVV7 248 aa11.45□□□□□ -0.58
SCNN1A-202ENST00000338748 DGAT2L7PQ6IED9 249 aa11.44□□□□□ -0.58
SCNN1A-202ENST00000338748 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
SCNN1A-202ENST00000338748 C10orf126Q8N4M7 172 aa11.44□□□□□ -0.58
SCNN1A-202ENST00000338748 OR5A1Q8NGJ0 315 aa11.44□□□□□ -0.58
SCNN1A-202ENST00000338748 COX6A2Q02221 97 aa11.43□□□□□ -0.58
SCNN1A-202ENST00000338748 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
SCNN1A-202ENST00000338748 CDKN2A-AS1Q9UH64 79 aa11.43□□□□□ -0.58
SCNN1A-202ENST00000338748 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
SCNN1A-202ENST00000338748 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCNN1A-202ENST00000338748 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
SCNN1A-202ENST00000338748 CIDEAO60543 219 aa11.42□□□□□ -0.58
SCNN1A-202ENST00000338748 GTSF1LQ9H1H1 148 aa11.42□□□□□ -0.58
SCNN1A-202ENST00000338748 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 WIPF1O43516 503 aa11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 TMEM243Q9BU79 118 aa11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 CDC42SE2Q9NRR3 84 aa11.41□□□□□ -0.58
SCNN1A-202ENST00000338748 A0A1B0GWB2 263 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 GTF2H5Q6ZYL4 71 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 VSIG2Q96IQ7 327 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 CSDC2Q9Y534 153 aaKnown RBP11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 TRAV13-1A0A0B4J241 112 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 IGHV4-28A0A0C4DH34 117 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 K7EP34 96 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 IGHV4-30-4P0DP06 118 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 SAMD5Q5TGI4 173 aa11.4□□□□□ -0.58
SCNN1A-202ENST00000338748 IGLV5-45A0A087WSX0 123 aa11.39□□□□□ -0.59
SCNN1A-202ENST00000338748 APOC4P55056 127 aa11.39□□□□□ -0.59
SCNN1A-202ENST00000338748 RBX1P62877 108 aa11.39□□□□□ -0.59
SCNN1A-202ENST00000338748 C21orf62-AS1Q17RA5 79 aa11.39□□□□□ -0.59
SCNN1A-202ENST00000338748 SPANXB1Q9NS25 103 aaPredicted RBP11.39□□□□□ -0.59
SCNN1A-202ENST00000338748 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
SCNN1A-202ENST00000338748 UBE2L6O14933 153 aa11.38□□□□□ -0.59
SCNN1A-202ENST00000338748 GAGE6Q13070 117 aa11.38□□□□□ -0.59
SCNN1A-202ENST00000338748 CELA1Q9UNI1 258 aa11.38□□□□□ -0.59
SCNN1A-202ENST00000338748 CBY1Q9Y3M2 126 aa11.38□□□□□ -0.59
SCNN1A-202ENST00000338748 A0A0J9YXY3 114 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 IGLL5B9A064 214 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 GYPEP15421 78 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 TIRAPP58753 221 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 Q8NAQ8 132 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 SPCS1Q9Y6A9 102 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 FABP2P12104 132 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
SCNN1A-202ENST00000338748 IGLV4-60A0A075B6I1 120 aa11.36□□□□□ -0.59
SCNN1A-202ENST00000338748 OCIAD2Q56VL3 154 aa11.36□□□□□ -0.59
SCNN1A-202ENST00000338748 LITAFQ99732 161 aa11.36□□□□□ -0.59
SCNN1A-202ENST00000338748 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
SCNN1A-202ENST00000338748 A0A096LPF7 62 aa11.35□□□□□ -0.59
SCNN1A-202ENST00000338748 KRTAP10-11P60412 298 aa11.35□□□□□ -0.59
SCNN1A-202ENST00000338748 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
SCNN1A-202ENST00000338748 LYRM9A8MSI8 78 aa11.35□□□□□ -0.59
SCNN1A-202ENST00000338748 HERVK_113P63121 156 aa11.35□□□□□ -0.59
SCNN1A-202ENST00000338748 FAM19A3Q7Z5A8 133 aa11.35□□□□□ -0.59
SCNN1A-202ENST00000338748 APOMO95445 188 aa11.34□□□□□ -0.59
SCNN1A-202ENST00000338748 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
SCNN1A-202ENST00000338748 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
SCNN1A-202ENST00000338748 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
SCNN1A-202ENST00000338748 A6NJY4 79 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms