RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FGF6P10767 208 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 GAGE6Q13070 117 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 SH2D6Q7Z4S9 175 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.78
CDK5RAP3-201ENST00000338399 PMVKQ15126 192 aa10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 RNASE13Q5GAN3 156 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MRPL35Q9NZE8 188 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 H7C423 109 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 AMMECR1LQ6DCA0 310 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 VCX2Q9H322 139 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 Q6ZUT4 128 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 NPSP0C0P6 89 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 SMAGPQ0VAQ4 97 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 PAPPA-AS1Q5QFB9 102 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 VAMP8Q9BV40 100 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 F8VRH5 84 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 AMELXQ99217 191 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TMEM262E9PQX1 116 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 PAM16Q9Y3D7 125 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 DPM2O94777 84 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 IGKCP01834 107 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 LELP1Q5T871 98 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TRAV9-2A0A087WT02 112 aa10.15□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
CDK5RAP3-201ENST00000338399 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGLV4-69A0A075B6H9 119 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGLL5B9A064 214 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 PLNP26678 52 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 STAB2Q8WWQ8 2551 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TIRAPP58753 221 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 ESRGQ1W209 222 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 CBY1Q9Y3M2 126 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 A0A0J9YXV3 536 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 RBX1P62877 108 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 STPG4Q8N801 248 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
CDK5RAP3-201ENST00000338399 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TCTAP57738 103 aa10.11□□□□□ -0.79
CDK5RAP3-201ENST00000338399 Q8N3U1 123 aa10.11□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TRAV8-6A0A0B4J262 113 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 UBE2D1P51668 147 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGLC3P0DOY3 106 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 ANKRD39Q53RE8 183 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGKV3OR2-268A0A0C4DH90 116 aa10.09□□□□□ -0.79
CDK5RAP3-201ENST00000338399 UQCR10Q9UDW1 63 aa10.09□□□□□ -0.79
CDK5RAP3-201ENST00000338399 BATFQ16520 125 aa10.08□□□□□ -0.8
CDK5RAP3-201ENST00000338399 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
CDK5RAP3-201ENST00000338399 WFDC10BQ8IUB3 73 aa10.08□□□□□ -0.8
CDK5RAP3-201ENST00000338399 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
CDK5RAP3-201ENST00000338399 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-201ENST00000338399 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-30P01768 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-33P01772 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-30-3P0DP02 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-30-5P0DP03 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 COX6A2Q02221 97 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 HNRNPA3P51991 378 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00588Q9Y4M8 146 aa10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 NMUP48645 174 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 CCL18P55774 89 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 DYNC2H1Q8NCM8 4307 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 NUPR2A6NF83 97 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 SEC11AP67812 179 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 APLNQ9ULZ1 77 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 HERVK_113P63121 156 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 REG3AQ06141 175 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 DNAH7Q8WXX0 4024 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms