RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 IGF1P05019 195 aa12.04□□□□□ -0.48
NPHP3-201ENST00000337331 RPL18AQ02543 176 aaKnown RBP12.04□□□□□ -0.48
NPHP3-201ENST00000337331 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
NPHP3-201ENST00000337331 IGLV10-54A0A075B6I4 117 aa12.03□□□□□ -0.48
NPHP3-201ENST00000337331 J3QKU1 62 aa12.03□□□□□ -0.48
NPHP3-201ENST00000337331 LRRK2Q5S007 2527 aa12.03□□□□□ -0.48
NPHP3-201ENST00000337331 XIRP2A4UGR9 3374 aa12.03□□□□□ -0.48
NPHP3-201ENST00000337331 A6NDX4 124 aa12.02□□□□□ -0.48
NPHP3-201ENST00000337331 GYPEP15421 78 aa12.02□□□□□ -0.48
NPHP3-201ENST00000337331 USP17L23D6RBM5 183 aa12.02□□□□□ -0.49
NPHP3-201ENST00000337331 K7EQD1 137 aa12.02□□□□□ -0.49
NPHP3-201ENST00000337331 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-201ENST00000337331 MIAQ16674 131 aa12.02□□□□□ -0.49
NPHP3-201ENST00000337331 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
NPHP3-201ENST00000337331 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.49
NPHP3-201ENST00000337331 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
NPHP3-201ENST00000337331 A8MZ25 164 aa12.01□□□□□ -0.49
NPHP3-201ENST00000337331 FAM236DA0A1B0GTK5 79 aa12.01□□□□□ -0.49
NPHP3-201ENST00000337331 FAM236CP0DP71 79 aa12.01□□□□□ -0.49
NPHP3-201ENST00000337331 TMEM223A0PJW6 202 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 HIST2H2BCQ6DN03 193 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 KIR2DL5BQ8NHK3 375 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 CNFNQ9BYD5 112 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 A0A087WVE0 104 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 COX7A2LO14548 114 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 VSIG2Q96IQ7 327 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 TIRAPP58753 221 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 SBSPONQ8IVN8 264 aa12□□□□□ -0.49
NPHP3-201ENST00000337331 IGHV1-58A0A0C4DH39 117 aa11.99□□□□□ -0.49
NPHP3-201ENST00000337331 LY6LH3BQJ8 138 aa11.99□□□□□ -0.49
NPHP3-201ENST00000337331 NDUFC2O95298 119 aa11.99□□□□□ -0.49
NPHP3-201ENST00000337331 C16orf74Q96GX8 76 aa11.99□□□□□ -0.49
NPHP3-201ENST00000337331 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
NPHP3-201ENST00000337331 TRBV7-7A0A0K0K1E9 115 aa11.98□□□□□ -0.49
NPHP3-201ENST00000337331 PSMB8P28062 276 aa11.98□□□□□ -0.49
NPHP3-201ENST00000337331 ZFAND3Q9H8U3 227 aa11.98□□□□□ -0.49
NPHP3-201ENST00000337331 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
NPHP3-201ENST00000337331 EBI3Q14213 229 aa11.97□□□□□ -0.49
NPHP3-201ENST00000337331 ORMDL1Q9P0S3 153 aa11.97□□□□□ -0.49
NPHP3-201ENST00000337331 TMEM89A2RUT3 159 aa11.97□□□□□ -0.49
NPHP3-201ENST00000337331 C19orf84I3L1E1 186 aa11.97□□□□□ -0.49
NPHP3-201ENST00000337331 MPLKIPQ8TAP9 179 aa11.97□□□□□ -0.49
NPHP3-201ENST00000337331 TNFRSF13BO14836 293 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-201ENST00000337331 LECT2O14960 151 aa11.96□□□□□ -0.49
NPHP3-201ENST00000337331 COX7B2Q8TF08 81 aa11.96□□□□□ -0.5
NPHP3-201ENST00000337331 IGLV4-69A0A075B6H9 119 aa11.95□□□□□ -0.5
NPHP3-201ENST00000337331 H0YGX0 51 aa11.95□□□□□ -0.5
NPHP3-201ENST00000337331 C20orf173Q96LM9 149 aa11.95□□□□□ -0.5
NPHP3-201ENST00000337331 CFAP54Q96N23 3096 aa11.95□□□□□ -0.5
NPHP3-201ENST00000337331 IGKV2D-24A0A075B6R9 120 aa11.95□□□□□ -0.5
NPHP3-201ENST00000337331 ZFAND2AQ8N6M9 145 aa11.95□□□□□ -0.5
NPHP3-201ENST00000337331 ZNF580Q9UK33 172 aa11.94□□□□□ -0.5
NPHP3-201ENST00000337331 C1orf195Q5TG92 126 aa11.94□□□□□ -0.5
NPHP3-201ENST00000337331 CXCL5P42830 114 aa11.93□□□□□ -0.5
NPHP3-201ENST00000337331 K7EQG2 157 aa11.93□□□□□ -0.5
NPHP3-201ENST00000337331 MIR7-3HGQ8N6C7 128 aa11.93□□□□□ -0.5
NPHP3-201ENST00000337331 LRP4O75096 1905 aa11.93□□□□□ -0.5
NPHP3-201ENST00000337331 IGHV4-4A0A075B6R2 117 aa11.93□□□□□ -0.5
NPHP3-201ENST00000337331 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
NPHP3-201ENST00000337331 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
NPHP3-201ENST00000337331 DEFB4AO15263 64 aa11.91□□□□□ -0.5
NPHP3-201ENST00000337331 MAP6D1Q9H9H5 199 aa11.91□□□□□ -0.5
NPHP3-201ENST00000337331 CDK2AP2O75956 126 aa11.91□□□□□ -0.5
NPHP3-201ENST00000337331 SPART-AS1P0CW21 52 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 IGLV4-3A0A075B6K6 122 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 CRYGDP07320 174 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 POLQO75417 2590 aa11.9□□□□□ -0.5
NPHP3-201ENST00000337331 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 RPS28P62857 69 aaKnown RBP11.89□□□□□ -0.51
NPHP3-201ENST00000337331 FASNP49327 2511 aaKnown RBP11.89□□□□□ -0.51
NPHP3-201ENST00000337331 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 C9orf66Q5T8R8 295 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 Q6ZTI0 123 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 NCR3O14931 201 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 PRR9Q5T870 116 aa11.89□□□□□ -0.51
NPHP3-201ENST00000337331 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 SNURFQ9Y675 71 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 DEFB105AQ8NG35 78 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 LINC00308Q8TCZ7 52 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 SLPIP03973 132 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 CRYGAP11844 174 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 PYGO1Q9Y3Y4 419 aa11.88□□□□□ -0.51
NPHP3-201ENST00000337331 C11orf71Q6IPW1 123 aa11.87□□□□□ -0.51
NPHP3-201ENST00000337331 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
NPHP3-201ENST00000337331 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
NPHP3-201ENST00000337331 POLR2KP53803 58 aaKnown RBP11.86□□□□□ -0.51
NPHP3-201ENST00000337331 PRO0628Q9UI54 55 aa11.86□□□□□ -0.51
NPHP3-201ENST00000337331 PIK3CD-AS1Q5SR53 167 aa11.86□□□□□ -0.51
NPHP3-201ENST00000337331 Q8N6K4 173 aa11.85□□□□□ -0.51
NPHP3-201ENST00000337331 RMI2Q96E14 147 aa11.85□□□□□ -0.51
NPHP3-201ENST00000337331 UPK3BQ9BT76 320 aa11.85□□□□□ -0.51
NPHP3-201ENST00000337331 M0QY20 66 aa11.85□□□□□ -0.51
NPHP3-201ENST00000337331 LINC00467Q9BRT7 94 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms