RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 Q9H8V8 135 aa6.09□□□□□ -1.43
HPS4-201ENST00000336873 NDUFV3P56181 108 aaKnown RBP6.09□□□□□ -1.44
HPS4-201ENST00000336873 TSPEAR-AS2P59090 65 aa6.09□□□□□ -1.44
HPS4-201ENST00000336873 HIVEP1P15822 2718 aa6.09□□□□□ -1.44
HPS4-201ENST00000336873 CCL24O00175 119 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 PSMB8P28062 276 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 K7EQG2 157 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 SLC25A20O43772 301 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 TCL1BO95988 128 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 IGHV3-30-3P0DP02 117 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 EDA2RQ9HAV5 297 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 IGLV2-18A0A075B6J9 118 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 TRAV8-4A0A0B4J246 113 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 M0QY20 66 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 PAX4O43316 350 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
HPS4-201ENST00000336873 J3QLI3 93 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 CRYGDP07320 174 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 ELANEP08246 267 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 SPANXA1Q9NS26 97 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 LINC00467Q9BRT7 94 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 CNFNQ9BYD5 112 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 STAB1Q9NY15 2570 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 F5H768 121 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 CFC1P0CG37 223 aa6.07□□□□□ -1.44
HPS4-201ENST00000336873 LOC100131303A0A0U1RQF7 123 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 SMIM9A6NGZ8 99 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 CRLF1O75462 422 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 XCL1P47992 114 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 H3BMM0 161 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 RHODO00212 210 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 Q6ZSN1 163 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 NDUFA11Q86Y39 141 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 C15orf53Q8NAA6 179 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 TMEM126AQ9H061 195 aa6.06□□□□□ -1.44
HPS4-201ENST00000336873 DNAL4O96015 105 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 C6orf226Q5I0X4 101 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 MAP6D1Q9H9H5 199 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 COL6A5A8TX70 2615 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 APCP25054 2843 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 IGLV4-3A0A075B6K6 122 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
HPS4-201ENST00000336873 ANKRD29Q8N6D5 301 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 TRAV12-1A0A0B4J245 112 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 TRAV25A0A0B4J276 109 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 KLLNB2CW77 178 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 J3KT08 172 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 TSHBP01222 138 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 IGLV1-40P01703 118 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 IGHV4-31P0DP07 118 aa6.05□□□□□ -1.44
HPS4-201ENST00000336873 ZNF22P17026 224 aaPredicted RBP6.05□□□□□ -1.44
HPS4-201ENST00000336873 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
HPS4-201ENST00000336873 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 RBMY1A1P0DJD3 496 aaKnown RBP6.04□□□□□ -1.44
HPS4-201ENST00000336873 RBMY1CP0DJD4 496 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 RBMY1FQ15415 496 aaKnown RBP6.04□□□□□ -1.44
HPS4-201ENST00000336873 GAGE2AQ6NT46 116 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 PKIGQ9Y2B9 76 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 H3BUA1 57 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 PIK3CD-AS1Q5SR53 167 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 K7EMT4 169 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 SOCS3O14543 225 aa6.04□□□□□ -1.44
HPS4-201ENST00000336873 BRI3O95415 125 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 LINC00694P0DN24 101 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 LINC00482Q8N8I6 264 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 ZNF702PQ9H963 129 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 TRBV7-3A0A075B6L6 115 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 A0A0J9YXY3 114 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 IGIPA6NJ69 53 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 NFE4Q86UQ8 179 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 Q9HAA7 133 aa6.03□□□□□ -1.44
HPS4-201ENST00000336873 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
HPS4-201ENST00000336873 DNAJC9-AS1A6NH13 148 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 MORN3Q6PF18 240 aaPredicted RBP6.02□□□□□ -1.45
HPS4-201ENST00000336873 LINC00526Q96FQ7 95 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 TIMM17AQ99595 171 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 ATXN8Q156A1 80 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 DEFB114Q30KQ6 69 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 POM121L12Q8N7R1 296 aa6.02□□□□□ -1.45
HPS4-201ENST00000336873 TRBV27A0A0K0K1C4 114 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 LEPROTO15243 131 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 Q6YL49 198 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 TRAV4A0A0B4J268 109 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 ATP5G1P05496 136 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 MALP21145 153 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 CFAP126Q5VTH2 177 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 SLC25A29Q8N8R3 303 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 ZMAT4Q9H898 229 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 NSD1Q96L73 2696 aaPredicted RBP6.01□□□□□ -1.45
HPS4-201ENST00000336873 DEFB135Q30KP9 77 aa6.01□□□□□ -1.45
HPS4-201ENST00000336873 RHOHQ15669 191 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms