RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 IGHV4-30-2A0A087WSY4 118 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 COX17Q14061 63 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 PATE2Q6UY27 113 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 PRORYQ9H606 182 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 SLURP1P55000 103 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 APRG1Q8IVJ8 170 aa4.7□□□□□ -1.66
CSMD1-201ENST00000335551 DEFB136Q30KP8 78 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 NRGNQ92686 78 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 UBE2D1P51668 147 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 PRR4Q16378 134 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 IGLV2-23P01705 113 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 Q8N976 141 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 Q8N9W7 124 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 C4orf3Q8WVX3 66 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
CSMD1-201ENST00000335551 PRYO14603 147 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 SLPIP03973 132 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 DIAPH2-AS1Q14236 149 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 MUC7Q8TAX7 377 aa4.69□□□□□ -1.66
CSMD1-201ENST00000335551 REG3AQ06141 175 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 A0A0J9YWU9 116 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 SPRY2O43597 315 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 ODF3L1Q8IXM7 274 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 ZFAND3Q9H8U3 227 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 PLA2G2EQ9NZK7 142 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 UBE2D3P61077 147 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 EBI3Q14213 229 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 ZNF524Q96C55 264 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 C2orf91Q6ZV80 131 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 TMEM89A2RUT3 159 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 NANOS2P60321 138 aaKnown RBP4.68□□□□□ -1.66
CSMD1-201ENST00000335551 EIF4EBP1Q13541 118 aaPredicted RBP4.68□□□□□ -1.66
CSMD1-201ENST00000335551 IGFL3Q6UXB1 125 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 LINC00467Q9BRT7 94 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 PRO0255Q9UI72 69 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
CSMD1-201ENST00000335551 PSPHP1O15172 72 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 SOSTDC1Q6X4U4 206 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 FAM19A1Q7Z5A9 133 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 CXCL6P80162 114 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 FAM30AQ9NZY2 134 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 C5orf56Q8N8D9 126 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 A0A0J9YX75 114 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 KRTAP27-1Q3LI81 207 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 CHCHD10Q8WYQ3 142 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-201ENST00000335551 CDKN2A-AS1Q9UH64 79 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 PRAC2D3DTV9 90 aa4.67□□□□□ -1.66
CSMD1-201ENST00000335551 GDF5OSQ5U4N7 250 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
CSMD1-201ENST00000335551 LINC00269Q8N2A0 174 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 PRSS33Q8NF86 280 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 AJUBAQ96IF1 538 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 IGLV4-3A0A075B6K6 122 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 SIRPDQ9H106 197 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 RSPO1Q2MKA7 263 aaPredicted RBP4.66□□□□□ -1.66
CSMD1-201ENST00000335551 C6orf99Q4VX62 202 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 C22orf34Q6ZV56 151 aa4.66□□□□□ -1.66
CSMD1-201ENST00000335551 IGKV1D-37A0A075B6S9 117 aa4.65□□□□□ -1.66
CSMD1-201ENST00000335551 A0A087WZ39 114 aa4.65□□□□□ -1.66
CSMD1-201ENST00000335551 PYGO1Q9Y3Y4 419 aa4.65□□□□□ -1.66
CSMD1-201ENST00000335551 C11orf53Q8IXP5 236 aa4.65□□□□□ -1.66
CSMD1-201ENST00000335551 DEFB135Q30KP9 77 aa4.65□□□□□ -1.66
CSMD1-201ENST00000335551 CEMP1Q6PRD7 247 aaPredicted RBP4.65□□□□□ -1.66
CSMD1-201ENST00000335551 IGLV2-8P01709 118 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 FRMD6-AS1P0C7T7 363 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 PCSK5Q92824 1860 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 A8MZ25 164 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 ZNF73O43830 326 aaPredicted RBP4.65□□□□□ -1.67
CSMD1-201ENST00000335551 LTBP2Q14767 1821 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 CRYGDP07320 174 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 MAPKAPK5-AS1Q8N8E1 139 aa4.65□□□□□ -1.67
CSMD1-201ENST00000335551 Q6ZVQ6 151 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 IGHV4-38-2P0DP08 117 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 Q6ZQY7 126 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 C11orf1Q9H5F2 150 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 AKAP13Q12802 2813 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 LOC107984640A0A0U1RRK4 108 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 CELA1Q9UNI1 258 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 IGKV2-24A0A0C4DH68 120 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 ZNF503-AS2A6NEH8 195 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 PROK2Q9HC23 129 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 M0R378 163 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 ESRGQ1W209 222 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 SMAD5-AS1Q9Y6J3 95 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 M0QY20 66 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 RITA1Q96K30 269 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 TRBV7-7A0A0K0K1E9 115 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 RPL28P46779 137 aaKnown RBP4.64□□□□□ -1.67
CSMD1-201ENST00000335551 INSL3P51460 131 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 MBD6Q96DN6 1003 aa4.64□□□□□ -1.67
CSMD1-201ENST00000335551 BPTFQ12830 3046 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 NTM-AS1Q6ZSK4 140 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 IGLV2-14P01704 120 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 COL27A1Q8IZC6 1860 aaPredicted RBP4.63□□□□□ -1.67
CSMD1-201ENST00000335551 HECTD1Q9ULT8 2610 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms