RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 WNK1Q9H4A3 2382 aa16.8■□□□□ 0.28
NDEL1-201ENST00000334527 CDKN2A-AS1Q9UH64 79 aa16.8■□□□□ 0.28
NDEL1-201ENST00000334527 NF1P21359 2839 aa16.8■□□□□ 0.28
NDEL1-201ENST00000334527 ZFAND6Q6FIF0 208 aa16.79■□□□□ 0.28
NDEL1-201ENST00000334527 PPDPFLQ8WWR9 84 aa16.79■□□□□ 0.28
NDEL1-201ENST00000334527 CITED2Q99967 270 aaPredicted RBP16.79■□□□□ 0.28
NDEL1-201ENST00000334527 MIAQ16674 131 aa16.78■□□□□ 0.28
NDEL1-201ENST00000334527 Q6ZTI0 123 aa16.78■□□□□ 0.28
NDEL1-201ENST00000334527 CARD19Q96LW7 228 aa16.78■□□□□ 0.28
NDEL1-201ENST00000334527 TIRAPP58753 221 aa16.77■□□□□ 0.28
NDEL1-201ENST00000334527 NPC2P61916 151 aa16.77■□□□□ 0.27
NDEL1-201ENST00000334527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.77■□□□□ 0.27
NDEL1-201ENST00000334527 NBPF19A0A087WUL8 3843 aa16.76■□□□□ 0.27
NDEL1-201ENST00000334527 IGLV5-45A0A087WSX0 123 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 C9JAW5 83 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 K7EQD1 137 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 SCGB1A1P11684 91 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 RPL36AP83881 106 aaKnown RBP16.75■□□□□ 0.27
NDEL1-201ENST00000334527 ANKRD29Q8N6D5 301 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 RPL36ALQ969Q0 106 aaKnown RBP16.75■□□□□ 0.27
NDEL1-201ENST00000334527 SLC25A20O43772 301 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 LINC00694P0DN24 101 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 COX6A2Q02221 97 aa16.75■□□□□ 0.27
NDEL1-201ENST00000334527 TMEM101Q96IK0 257 aa16.74■□□□□ 0.27
NDEL1-201ENST00000334527 CUBNO60494 3623 aa16.74■□□□□ 0.27
NDEL1-201ENST00000334527 FLNAP21333 2647 aaKnown RBP16.74■□□□□ 0.27
NDEL1-201ENST00000334527 TRBV10-1A0A0K0K1A3 114 aa16.73■□□□□ 0.27
NDEL1-201ENST00000334527 TRIAP1O43715 76 aa16.73■□□□□ 0.27
NDEL1-201ENST00000334527 TRAV4A0A0B4J268 109 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 TRBV30A0A0K0K1B3 111 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 HIST2H2BCQ6DN03 193 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 NOP10Q9NPE3 64 aaKnown RBP16.72■□□□□ 0.27
NDEL1-201ENST00000334527 ATXN8Q156A1 80 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 LINC00242Q5T6M2 205 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 NTM-AS1Q6ZSK4 140 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 CDIP1Q9H305 208 aa16.72■□□□□ 0.27
NDEL1-201ENST00000334527 NDUFA1O15239 70 aa16.71■□□□□ 0.27
NDEL1-201ENST00000334527 TIMM17BO60830 172 aa16.71■□□□□ 0.27
NDEL1-201ENST00000334527 HERVK_113P63121 156 aa16.71■□□□□ 0.27
NDEL1-201ENST00000334527 DAZ2Q13117 558 aaKnown RBP16.71■□□□□ 0.27
NDEL1-201ENST00000334527 DAZ4Q86SG3 579 aaKnown RBP16.71■□□□□ 0.27
NDEL1-201ENST00000334527 DAZ3Q9NR90 486 aaKnown RBP16.71■□□□□ 0.27
NDEL1-201ENST00000334527 YAE1D1Q9NRH1 226 aa16.71■□□□□ 0.27
NDEL1-201ENST00000334527 LINC01006Q8NI28 216 aa16.71■□□□□ 0.26
NDEL1-201ENST00000334527 GAGE12JA6NER3 117 aa16.7■□□□□ 0.26
NDEL1-201ENST00000334527 NDUFA7O95182 113 aa16.7■□□□□ 0.26
NDEL1-201ENST00000334527 GAGE4Q13068 117 aa16.7■□□□□ 0.26
NDEL1-201ENST00000334527 GAGE5Q13069 117 aa16.7■□□□□ 0.26
NDEL1-201ENST00000334527 DAND5Q8N907 189 aa16.7■□□□□ 0.26
NDEL1-201ENST00000334527 WFDC10AQ9H1F0 79 aa16.7■□□□□ 0.26
NDEL1-201ENST00000334527 GIG44P09565 113 aaPredicted RBP16.69■□□□□ 0.26
NDEL1-201ENST00000334527 ICOSQ9Y6W8 199 aa16.69■□□□□ 0.26
NDEL1-201ENST00000334527 CCDC168Q8NDH2 2452 aa16.68■□□□□ 0.26
NDEL1-201ENST00000334527 NIPBLQ6KC79 2804 aaeCLIP16.68■□□□□ 0.26
NDEL1-201ENST00000334527 M0QXV9 152 aa16.68■□□□□ 0.26
NDEL1-201ENST00000334527 LINC01620Q4KN68 170 aa16.68■□□□□ 0.26
NDEL1-201ENST00000334527 CSDC2Q9Y534 153 aaKnown RBP16.68■□□□□ 0.26
NDEL1-201ENST00000334527 TRAV13-1A0A0B4J241 112 aa16.67■□□□□ 0.26
NDEL1-201ENST00000334527 IGLV5-39A0A0G2JS06 123 aa16.67■□□□□ 0.26
NDEL1-201ENST00000334527 IFITM1P13164 125 aa16.67■□□□□ 0.26
NDEL1-201ENST00000334527 CMC4P56277 68 aaPredicted RBP16.66■□□□□ 0.26
NDEL1-201ENST00000334527 RNF183Q96D59 192 aa16.66■□□□□ 0.26
NDEL1-201ENST00000334527 SETXQ7Z333 2677 aaKnown RBP16.66■□□□□ 0.26
NDEL1-201ENST00000334527 RPL35AP18077 110 aaKnown RBP16.66■□□□□ 0.26
NDEL1-201ENST00000334527 KRTAP1-1Q07627 177 aa16.66■□□□□ 0.26
NDEL1-201ENST00000334527 FAM19A3Q7Z5A8 133 aa16.66■□□□□ 0.26
NDEL1-201ENST00000334527 Q9H8V8 135 aa16.66■□□□□ 0.26
NDEL1-201ENST00000334527 RNASE1P07998 156 aaKnown RBP16.65■□□□□ 0.26
NDEL1-201ENST00000334527 CIRBPQ14011 172 aaKnown RBP16.65■□□□□ 0.26
NDEL1-201ENST00000334527 C16orf74Q96GX8 76 aa16.65■□□□□ 0.26
NDEL1-201ENST00000334527 C16orf95Q9H693 158 aa16.65■□□□□ 0.26
NDEL1-201ENST00000334527 PLAC8L1A1L4L8 177 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 GAGE7O76087 117 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 GAGE12FP0CL80 117 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 GAGE12GP0CL81 117 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 GAGE12IP0CL82 117 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 SMIM1B2RUZ4 78 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 CDC42SE2Q9NRR3 84 aa16.64■□□□□ 0.25
NDEL1-201ENST00000334527 TENM4Q6N022 2769 aa16.63■□□□□ 0.25
NDEL1-201ENST00000334527 SETD2Q9BYW2 2564 aaPredicted RBP16.63■□□□□ 0.25
NDEL1-201ENST00000334527 TRGV2A0A075B6R0 118 aa16.63■□□□□ 0.25
NDEL1-201ENST00000334527 ZNF625Q96I27 306 aaPredicted RBP16.63■□□□□ 0.25
NDEL1-201ENST00000334527 IGLV1-51P01701 117 aa16.62■□□□□ 0.25
NDEL1-201ENST00000334527 COX6CP09669 75 aa16.62■□□□□ 0.25
NDEL1-201ENST00000334527 RPL13AP40429 203 aaKnown RBP16.62■□□□□ 0.25
NDEL1-201ENST00000334527 C19orf73Q9NVV2 129 aa16.62■□□□□ 0.25
NDEL1-201ENST00000334527 UBE2L6O14933 153 aa16.61■□□□□ 0.25
NDEL1-201ENST00000334527 TRBV10-2A0A0K0K1G8 114 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 NTN5Q8WTR8 489 aaPredicted RBP16.6■□□□□ 0.25
NDEL1-201ENST00000334527 TMEM243Q9BU79 118 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 JMJD1CQ15652 2540 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 LOC100131303A0A0U1RQF7 123 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 A0A0U1RRA0 63 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 XGP55808 180 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 NOTCH3Q9UM47 2321 aa16.6■□□□□ 0.25
NDEL1-201ENST00000334527 MT-ATP8P03928 68 aa16.59■□□□□ 0.25
NDEL1-201ENST00000334527 LINC00308Q8TCZ7 52 aa16.59■□□□□ 0.25
NDEL1-201ENST00000334527 FAM110AQ9BQ89 295 aa16.59■□□□□ 0.25
NDEL1-201ENST00000334527 PDZD2O15018 2839 aa16.58■□□□□ 0.24
NDEL1-201ENST00000334527 CSNK1G2-AS1Q8NCQ2 148 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms