RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SPINK14Q6IE38 97 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 H3BRN7 92 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 ANGP03950 147 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 MLANAQ16655 118 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 COL4A6Q14031 1691 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 Q6ZSR3 168 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 KLHL30-AS1Q8NEE0 82 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 RNASE6Q93091 150 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGHV4-38-2P0DP08 117 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 KLF14Q8TD94 323 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 C17orf100A8MU93 164 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 FOXS1O43638 330 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 TSPEAR-AS2P59090 65 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 HIVEP2P31629 2446 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 PIEZO1Q92508 2521 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 SPINK2P20155 84 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 MSRB1Q9NZV6 116 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 U3KQK5 164 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGLV3-12A0A075B6K2 115 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
CDC42BPA-201ENST00000334218 DSCR9P59020 149 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 FOXL2NBQ6ZUU3 175 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 WISP3O95389 354 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGKV1-5P01602 117 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 P0C879 139 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 HRKO00198 91 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 TTTY12Q9BZ98 90 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 MYO9AB2RTY4 2548 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 DOPEY1Q5JWR5 2465 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGKV1D-43A0A0B4J1Z2 117 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGLV5-37A0A075B6J1 123 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 LRCOL1A6NCL2 159 aa4.53□□□□□ -1.68
CDC42BPA-201ENST00000334218 NUPR1O60356 82 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGHV3-23P01764 117 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 LY6G6EA0A0G2JKS1 128 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGKV1D-13A0A0B4J2D9 117 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGKV1-13P0DP09 117 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 ITLN1Q8WWA0 313 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGLV1-50A0A075B6I6 118 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 FAM229AH3BQW9 127 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 ZFAND2AQ8N6M9 145 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 CTSZQ9UBR2 303 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGHV3-53P01767 116 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 NFE4Q86UQ8 179 aa4.52□□□□□ -1.69
CDC42BPA-201ENST00000334218 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 Q8TAT8 98 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 K7EQD1 137 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 C16orf47Q6ZP98 133 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 LINC01547P58512 204 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 DEFB114Q30KQ6 69 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 FAM19A4Q96LR4 140 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 ZNF702PQ9H963 129 aa4.51□□□□□ -1.69
CDC42BPA-201ENST00000334218 K7EMT4 169 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 PTPN13Q12923 2485 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGHV4-61A0A0C4DH41 118 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGHV1-46P01743 117 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 LINC01560Q8TB33 94 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 ODF3Q96PU9 254 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGHV4-30-2A0A087WSY4 118 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 RPL37AP8A6NKH3 93 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 C16orf74Q96GX8 76 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 C6orf48Q9UBA6 75 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 M0R378 163 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGKV1D-16P01601 117 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 SPRNQ5BIV9 151 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGLV8-61A0A075B6I0 122 aa4.5□□□□□ -1.69
CDC42BPA-201ENST00000334218 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 DNAJC9-AS1A6NH13 148 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 Q8N814 137 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGKV2-24A0A0C4DH68 120 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 C20orf203Q8NBC4 194 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 CSRP3P50461 194 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 RIF1Q5UIP0 2472 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 H3BUX3 64 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 LEAP2Q969E1 77 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 LINC00114Q6XXX2 140 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 LINC00482Q8N8I6 264 aa4.49□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGHV3-66A0A0C4DH42 116 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 ACACBO00763 2458 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 ABCA12Q86UK0 2595 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 GNRH2O43555 120 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGLV3-21P80748 117 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGLV10-54A0A075B6I4 117 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 C22orf34Q6ZV56 151 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 NCOR2Q9Y618 2525 aa4.48□□□□□ -1.69
CDC42BPA-201ENST00000334218 HTN3P15516 51 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 DEFB121Q5J5C9 76 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGFL3Q6UXB1 125 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 MYO18BQ8IUG5 2567 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 BUB1B-PAK6H3BSN5 160 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 CCL19Q99731 98 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 C19orf71A6NCJ1 209 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms