RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NXPH4O95158 308 aa8.77□□□□□ -1
HDAC6-201ENST00000334136 RHOHQ15669 191 aa8.77□□□□□ -1
HDAC6-201ENST00000334136 K7EQG2 157 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 INAFM2P0DMQ5 153 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 DEFB130BP0DP73 79 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 DEFB130AP0DP74 79 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 TACC2O95359 2948 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 A0A096LNJ9 63 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 TEX49A0A1B0GTD5 131 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 RHODO00212 210 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 HHLA3Q9XRX5 114 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 ICOSQ9Y6W8 199 aa8.77□□□□□ -1.01
HDAC6-201ENST00000334136 CITED1Q99966 193 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 ZMAT4Q9H898 229 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 MAP6D1Q9H9H5 199 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 FAM236AA0A1B0GUQ0 79 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 FAM236BA0A1B0GV22 79 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 BAALC-AS2P0C853 105 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 ZFHX4Q86UP3 3567 aa8.76□□□□□ -1.01
HDAC6-201ENST00000334136 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-201ENST00000334136 COL6A5A8TX70 2615 aa8.75□□□□□ -1.01
HDAC6-201ENST00000334136 SETXQ7Z333 2677 aaKnown RBP8.75□□□□□ -1.01
HDAC6-201ENST00000334136 A0A0J9YY99 117 aa8.75□□□□□ -1.01
HDAC6-201ENST00000334136 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
HDAC6-201ENST00000334136 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
HDAC6-201ENST00000334136 IGHV3-30-3P0DP02 117 aa8.74□□□□□ -1.01
HDAC6-201ENST00000334136 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
HDAC6-201ENST00000334136 A0A0J9YX75 114 aa8.74□□□□□ -1.01
HDAC6-201ENST00000334136 P0DMU3 169 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 SOCS3O14543 225 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 XGP55808 180 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 RNF152Q8N8N0 203 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 MGAM2Q2M2H8 2515 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 NRACQ8N912 160 aa8.73□□□□□ -1.01
HDAC6-201ENST00000334136 C20orf203Q8NBC4 194 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 SLC25A29Q8N8R3 303 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 C20orf173Q96LM9 149 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 U3KQE9 123 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 EDN2P20800 178 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 HERVK_113P63121 156 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 LINC00482Q8N8I6 264 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 CELSR2Q9HCU4 2923 aa8.72□□□□□ -1.01
HDAC6-201ENST00000334136 STAB1Q9NY15 2570 aa8.71□□□□□ -1.01
HDAC6-201ENST00000334136 DEFB135Q30KP9 77 aa8.71□□□□□ -1.01
HDAC6-201ENST00000334136 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 DAD1P61803 113 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 NDUFV3P56181 108 aaKnown RBP8.71□□□□□ -1.02
HDAC6-201ENST00000334136 PRR9Q5T870 116 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 CFAP126Q5VTH2 177 aa8.71□□□□□ -1.02
HDAC6-201ENST00000334136 ZFAND2AQ8N6M9 145 aa8.7□□□□□ -1.02
HDAC6-201ENST00000334136 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
HDAC6-201ENST00000334136 HAMPP81172 84 aa8.7□□□□□ -1.02
HDAC6-201ENST00000334136 MRPL23Q16540 153 aaKnown RBP8.7□□□□□ -1.02
HDAC6-201ENST00000334136 C5orf38Q86SI9 138 aa8.7□□□□□ -1.02
HDAC6-201ENST00000334136 TRBV7-3A0A075B6L6 115 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 A0A096LPF7 62 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 A8MZ25 164 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
HDAC6-201ENST00000334136 RELNP78509 3460 aa8.68□□□□□ -1.02
HDAC6-201ENST00000334136 HERV-K104P63124 156 aa8.68□□□□□ -1.02
HDAC6-201ENST00000334136 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
HDAC6-201ENST00000334136 IGHV3-33P01772 117 aa8.68□□□□□ -1.02
HDAC6-201ENST00000334136 PRB2P02812 416 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-201ENST00000334136 Q9HAA7 133 aa8.68□□□□□ -1.02
HDAC6-201ENST00000334136 TRAV4A0A0B4J268 109 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 F5H768 121 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 WFDC10AQ9H1F0 79 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 MRPS12O15235 138 aaKnown RBP8.67□□□□□ -1.02
HDAC6-201ENST00000334136 TRIAP1O43715 76 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-201ENST00000334136 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 NOP10Q9NPE3 64 aaKnown RBP8.67□□□□□ -1.02
HDAC6-201ENST00000334136 H3BT86 120 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 TRACP01848 142 aa8.67□□□□□ -1.02
HDAC6-201ENST00000334136 HRNRQ86YZ3 2850 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-201ENST00000334136 NFE4Q86UQ8 179 aa8.66□□□□□ -1.02
HDAC6-201ENST00000334136 TMEM126AQ9H061 195 aa8.66□□□□□ -1.02
HDAC6-201ENST00000334136 MED14OSP0DP75 135 aa8.66□□□□□ -1.02
HDAC6-201ENST00000334136 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
HDAC6-201ENST00000334136 XCL1P47992 114 aa8.66□□□□□ -1.02
HDAC6-201ENST00000334136 SS18Q15532 418 aa8.66□□□□□ -1.02
HDAC6-201ENST00000334136 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.02
HDAC6-201ENST00000334136 ZANQ9Y493 2812 aa8.65□□□□□ -1.02
HDAC6-201ENST00000334136 IGHV3-30P01768 117 aa8.65□□□□□ -1.02
HDAC6-201ENST00000334136 IGHV3-30-5P0DP03 117 aa8.65□□□□□ -1.02
HDAC6-201ENST00000334136 VSIG2Q96IQ7 327 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms