RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 DEFB114Q30KQ6 69 aa12.96□□□□□ -0.33
TRIM50-201ENST00000333149 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.96□□□□□ -0.34
TRIM50-201ENST00000333149 IGKV2-29A2NJV5 120 aaPredicted RBP12.96□□□□□ -0.34
TRIM50-201ENST00000333149 TRIAP1O43715 76 aa12.96□□□□□ -0.34
TRIM50-201ENST00000333149 PRSS2P07478 247 aa12.96□□□□□ -0.34
TRIM50-201ENST00000333149 CR1P17927 2039 aa12.96□□□□□ -0.34
TRIM50-201ENST00000333149 INSP01308 110 aa12.95□□□□□ -0.34
TRIM50-201ENST00000333149 YAE1D1Q9NRH1 226 aa12.95□□□□□ -0.34
TRIM50-201ENST00000333149 TRBV10-2A0A0K0K1G8 114 aa12.95□□□□□ -0.34
TRIM50-201ENST00000333149 IFITM1P13164 125 aa12.95□□□□□ -0.34
TRIM50-201ENST00000333149 RPL13AP40429 203 aaKnown RBP12.95□□□□□ -0.34
TRIM50-201ENST00000333149 CREBBPQ92793 2442 aa12.94□□□□□ -0.34
TRIM50-201ENST00000333149 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
TRIM50-201ENST00000333149 GEMIN7Q9H840 131 aaKnown RBP12.94□□□□□ -0.34
TRIM50-201ENST00000333149 ICOSQ9Y6W8 199 aa12.93□□□□□ -0.34
TRIM50-201ENST00000333149 A8MZ25 164 aa12.93□□□□□ -0.34
TRIM50-201ENST00000333149 DYNLRB2Q8TF09 96 aa12.93□□□□□ -0.34
TRIM50-201ENST00000333149 NDUFA1O15239 70 aa12.92□□□□□ -0.34
TRIM50-201ENST00000333149 FAM19A3Q7Z5A8 133 aa12.92□□□□□ -0.34
TRIM50-201ENST00000333149 CDKN2A-AS1Q9UH64 79 aa12.92□□□□□ -0.34
TRIM50-201ENST00000333149 IGHV3-38A0A0C4DH36 116 aa12.91□□□□□ -0.34
TRIM50-201ENST00000333149 IL17DQ8TAD2 202 aa12.91□□□□□ -0.34
TRIM50-201ENST00000333149 NTN5Q8WTR8 489 aaPredicted RBP12.91□□□□□ -0.34
TRIM50-201ENST00000333149 TMEM101Q96IK0 257 aa12.91□□□□□ -0.34
TRIM50-201ENST00000333149 COX6CP09669 75 aa12.9□□□□□ -0.34
TRIM50-201ENST00000333149 ITPR3Q14573 2671 aa12.9□□□□□ -0.34
TRIM50-201ENST00000333149 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
TRIM50-201ENST00000333149 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
TRIM50-201ENST00000333149 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
TRIM50-201ENST00000333149 CSDC2Q9Y534 153 aaKnown RBP12.89□□□□□ -0.35
TRIM50-201ENST00000333149 AKAP9Q99996 3911 aa12.89□□□□□ -0.35
TRIM50-201ENST00000333149 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
TRIM50-201ENST00000333149 IGHV3OR16-12A0A075B7B8 117 aa12.88□□□□□ -0.35
TRIM50-201ENST00000333149 HERVK_113P63121 156 aa12.88□□□□□ -0.35
TRIM50-201ENST00000333149 CITED1Q99966 193 aa12.88□□□□□ -0.35
TRIM50-201ENST00000333149 H3BT86 120 aa12.88□□□□□ -0.35
TRIM50-201ENST00000333149 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
TRIM50-201ENST00000333149 TEX15Q9BXT5 2789 aa12.87□□□□□ -0.35
TRIM50-201ENST00000333149 H7C423 109 aa12.87□□□□□ -0.35
TRIM50-201ENST00000333149 LINC00242Q5T6M2 205 aa12.87□□□□□ -0.35
TRIM50-201ENST00000333149 DGAT2L7PQ6IED9 249 aa12.87□□□□□ -0.35
TRIM50-201ENST00000333149 C1orf158Q8N1D5 194 aa12.87□□□□□ -0.35
TRIM50-201ENST00000333149 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
TRIM50-201ENST00000333149 COX6A2Q02221 97 aa12.86□□□□□ -0.35
TRIM50-201ENST00000333149 TMEM86BQ8N661 226 aa12.86□□□□□ -0.35
TRIM50-201ENST00000333149 LST1O00453 97 aa12.86□□□□□ -0.35
TRIM50-201ENST00000333149 CIRBPQ14011 172 aaKnown RBP12.86□□□□□ -0.35
TRIM50-201ENST00000333149 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
TRIM50-201ENST00000333149 TEX49A0A1B0GTD5 131 aa12.84□□□□□ -0.35
TRIM50-201ENST00000333149 C2orf82Q6UX34 121 aa12.84□□□□□ -0.35
TRIM50-201ENST00000333149 Q6ZSV7 163 aa12.84□□□□□ -0.35
TRIM50-201ENST00000333149 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
TRIM50-201ENST00000333149 KHDC1LQ5JSQ8 128 aa12.84□□□□□ -0.35
TRIM50-201ENST00000333149 UBE2WQ96B02 151 aa12.84□□□□□ -0.35
TRIM50-201ENST00000333149 FLNBO75369 2602 aaKnown RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 NPC2P61916 151 aa12.83□□□□□ -0.36
TRIM50-201ENST00000333149 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 STHQ8IWL8 128 aa12.83□□□□□ -0.36
TRIM50-201ENST00000333149 CITED2Q99967 270 aaPredicted RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
TRIM50-201ENST00000333149 LINC00694P0DN24 101 aa12.83□□□□□ -0.36
TRIM50-201ENST00000333149 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
TRIM50-201ENST00000333149 LINC00308Q8TCZ7 52 aa12.83□□□□□ -0.36
TRIM50-201ENST00000333149 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.36
TRIM50-201ENST00000333149 MYO9AB2RTY4 2548 aa12.82□□□□□ -0.36
TRIM50-201ENST00000333149 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 TEX29Q8N6K0 151 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 PPDPFQ9H3Y8 114 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 Q9H8V8 135 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 SMIM1B2RUZ4 78 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 K7EQD1 137 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 DAND5Q8N907 189 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 COPS9Q8WXC6 57 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 CLEC2BQ92478 149 aa12.81□□□□□ -0.36
TRIM50-201ENST00000333149 ACANP16112 2415 aa12.8□□□□□ -0.36
TRIM50-201ENST00000333149 MXRA5Q9NR99 2828 aa12.8□□□□□ -0.36
TRIM50-201ENST00000333149 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
TRIM50-201ENST00000333149 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
TRIM50-201ENST00000333149 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
TRIM50-201ENST00000333149 Q6Q795 121 aa12.79□□□□□ -0.36
TRIM50-201ENST00000333149 TRAV26-1A0A087WT03 109 aa12.78□□□□□ -0.36
TRIM50-201ENST00000333149 F5H768 121 aa12.78□□□□□ -0.36
TRIM50-201ENST00000333149 SNCGO76070 127 aa12.78□□□□□ -0.36
TRIM50-201ENST00000333149 Q6ZTI0 123 aa12.78□□□□□ -0.36
TRIM50-201ENST00000333149 FAM240AA0A1B0GVK7 77 aa12.77□□□□□ -0.37
TRIM50-201ENST00000333149 KRTAP1-1Q07627 177 aa12.77□□□□□ -0.37
TRIM50-201ENST00000333149 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
TRIM50-201ENST00000333149 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.37
TRIM50-201ENST00000333149 HERV-K104P63124 156 aa12.76□□□□□ -0.37
TRIM50-201ENST00000333149 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
TRIM50-201ENST00000333149 GAGE2EQ4V326 116 aa12.76□□□□□ -0.37
TRIM50-201ENST00000333149 GAGE2DQ9UEU5 116 aa12.76□□□□□ -0.37
TRIM50-201ENST00000333149 NDUFA7O95182 113 aa12.76□□□□□ -0.37
TRIM50-201ENST00000333149 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
TRIM50-201ENST00000333149 SOSTDC1Q6X4U4 206 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms