RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 SLPIP03973 132 aa11.74□□□□□ -0.53
SLIT3-201ENST00000332966 CSPG4Q6UVK1 2322 aa11.74□□□□□ -0.53
SLIT3-201ENST00000332966 Q6JHZ5 121 aa11.73□□□□□ -0.53
SLIT3-201ENST00000332966 PTPRQQ9UMZ3 2332 aa11.73□□□□□ -0.53
SLIT3-201ENST00000332966 Q6ZTI0 123 aa11.71□□□□□ -0.53
SLIT3-201ENST00000332966 DIRC1Q969H9 104 aa11.71□□□□□ -0.53
SLIT3-201ENST00000332966 SORL1Q92673 2214 aa11.71□□□□□ -0.53
SLIT3-201ENST00000332966 C11orf71Q6IPW1 123 aa11.71□□□□□ -0.54
SLIT3-201ENST00000332966 APOC4P55056 127 aa11.7□□□□□ -0.54
SLIT3-201ENST00000332966 BRK1Q8WUW1 75 aa11.7□□□□□ -0.54
SLIT3-201ENST00000332966 DCANP1Q8TF63 244 aa11.7□□□□□ -0.54
SLIT3-201ENST00000332966 ADAMTS20P59510 1910 aa11.7□□□□□ -0.54
SLIT3-201ENST00000332966 C4orf3Q8WVX3 66 aa11.7□□□□□ -0.54
SLIT3-201ENST00000332966 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
SLIT3-201ENST00000332966 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
SLIT3-201ENST00000332966 PRB1P04280 392 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 COL4A2P08572 1712 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 TRBV7-7A0A0K0K1E9 115 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 SPAG11BQ08648 103 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 DEFB105AQ8NG35 78 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 Q96MF0 132 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 CENPFP49454 3210 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 SMIM11BQ8TCY0 68 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 AMELXQ99217 191 aa11.68□□□□□ -0.54
SLIT3-201ENST00000332966 Q6ZSV7 163 aa11.67□□□□□ -0.54
SLIT3-201ENST00000332966 CAMK2N2Q96S95 79 aa11.67□□□□□ -0.54
SLIT3-201ENST00000332966 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
SLIT3-201ENST00000332966 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
SLIT3-201ENST00000332966 SBSPONQ8IVN8 264 aa11.66□□□□□ -0.54
SLIT3-201ENST00000332966 BDP1A6H8Y1 2624 aa11.66□□□□□ -0.54
SLIT3-201ENST00000332966 FAM208BQ5VWN6 2430 aa11.66□□□□□ -0.54
SLIT3-201ENST00000332966 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.54
SLIT3-201ENST00000332966 NDUFC1O43677 76 aa11.65□□□□□ -0.55
SLIT3-201ENST00000332966 ZNF580Q9UK33 172 aa11.65□□□□□ -0.55
SLIT3-201ENST00000332966 ACACBO00763 2458 aa11.64□□□□□ -0.55
SLIT3-201ENST00000332966 CDK2AP2O75956 126 aa11.64□□□□□ -0.55
SLIT3-201ENST00000332966 COX7BP24311 80 aa11.64□□□□□ -0.55
SLIT3-201ENST00000332966 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
SLIT3-201ENST00000332966 LINC00242Q5T6M2 205 aa11.64□□□□□ -0.55
SLIT3-201ENST00000332966 IGLV1-40P01703 118 aa11.63□□□□□ -0.55
SLIT3-201ENST00000332966 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
SLIT3-201ENST00000332966 ATP5EP56381 51 aaPredicted RBP11.63□□□□□ -0.55
SLIT3-201ENST00000332966 PRO0255Q9UI72 69 aa11.63□□□□□ -0.55
SLIT3-201ENST00000332966 DEFB114Q30KQ6 69 aa11.62□□□□□ -0.55
SLIT3-201ENST00000332966 FAM19A5Q7Z5A7 132 aaPredicted RBP11.62□□□□□ -0.55
SLIT3-201ENST00000332966 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
SLIT3-201ENST00000332966 MP68P56378 58 aa11.61□□□□□ -0.55
SLIT3-201ENST00000332966 KIF25-AS1Q9Y6Z4 181 aa11.61□□□□□ -0.55
SLIT3-201ENST00000332966 TRBV6-8A0A0A6YYG3 113 aa11.61□□□□□ -0.55
SLIT3-201ENST00000332966 TRBV6-4A0A1B0GX49 114 aa11.61□□□□□ -0.55
SLIT3-201ENST00000332966 C6orf99Q4VX62 202 aa11.61□□□□□ -0.55
SLIT3-201ENST00000332966 ETDCA0A1B0GVM5 59 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 SHISA2Q6UWI4 295 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 BPY2O14599 106 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 PRORYQ9H606 182 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
SLIT3-201ENST00000332966 CCKP06307 115 aa11.59□□□□□ -0.55
SLIT3-201ENST00000332966 CCL18P55774 89 aa11.59□□□□□ -0.55
SLIT3-201ENST00000332966 WFDC9Q8NEX5 89 aa11.59□□□□□ -0.55
SLIT3-201ENST00000332966 NRGNQ92686 78 aa11.58□□□□□ -0.56
SLIT3-201ENST00000332966 HRCT1Q6UXD1 115 aa11.58□□□□□ -0.56
SLIT3-201ENST00000332966 BPTFQ12830 3046 aa11.57□□□□□ -0.56
SLIT3-201ENST00000332966 C10orf99Q6UWK7 81 aa11.57□□□□□ -0.56
SLIT3-201ENST00000332966 PPDPFQ9H3Y8 114 aa11.57□□□□□ -0.56
SLIT3-201ENST00000332966 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
SLIT3-201ENST00000332966 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
SLIT3-201ENST00000332966 IGKV2D-24A0A075B6R9 120 aa11.57□□□□□ -0.56
SLIT3-201ENST00000332966 A0A087WVE0 104 aa11.57□□□□□ -0.56
SLIT3-201ENST00000332966 LINC00269Q8N2A0 174 aa11.57□□□□□ -0.56
SLIT3-201ENST00000332966 RAI1Q7Z5J4 1906 aaPredicted RBP11.57□□□□□ -0.56
SLIT3-201ENST00000332966 DNAH12Q6ZR08 3092 aa11.56□□□□□ -0.56
SLIT3-201ENST00000332966 MPLKIPQ8TAP9 179 aa11.56□□□□□ -0.56
SLIT3-201ENST00000332966 PRRC2AP48634 2157 aaKnown RBP11.56□□□□□ -0.56
SLIT3-201ENST00000332966 SPART-AS1P0CW21 52 aa11.56□□□□□ -0.56
SLIT3-201ENST00000332966 CHCHD10Q8WYQ3 142 aaPredicted RBP11.56□□□□□ -0.56
SLIT3-201ENST00000332966 PKIGQ9Y2B9 76 aa11.56□□□□□ -0.56
SLIT3-201ENST00000332966 SCXQ7RTU7 201 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 ESM1Q9NQ30 184 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 SMIM26A0A096LP01 95 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 BRI3O95415 125 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 REG3AQ06141 175 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 KLK12Q9UKR0 248 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 SNURFQ9Y675 71 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 UBE2BP63146 152 aa11.55□□□□□ -0.56
SLIT3-201ENST00000332966 PIEZO2Q9H5I5 2752 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 PRM2P04554 102 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 COX6A2Q02221 97 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 PTPRBP23467 1997 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 LOC107984640A0A0U1RRK4 108 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 TRAV7A0A075B6U4 112 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 LINC00315P59091 139 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 RMI2Q96E14 147 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 SERP1Q9Y6X1 66 aa11.54□□□□□ -0.56
SLIT3-201ENST00000332966 PSCAO43653 123 aa11.53□□□□□ -0.56
SLIT3-201ENST00000332966 Q6YL49 198 aa11.53□□□□□ -0.56
SLIT3-201ENST00000332966 A0A087WYN8 130 aa11.52□□□□□ -0.57
SLIT3-201ENST00000332966 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
SLIT3-201ENST00000332966 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms