RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 DSCR9P59020 149 aa7.27□□□□□ -1.25
CSGALNACT1-201ENST00000332246 FLNCQ14315 2725 aa7.27□□□□□ -1.25
CSGALNACT1-201ENST00000332246 ITPR3Q14573 2671 aa7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 TRIAP1O43715 76 aa7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 ANGP03950 147 aaKnown RBP7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 CITED2Q99967 270 aaPredicted RBP7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 POLR2KP53803 58 aaKnown RBP7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 NBEAL2Q6ZNJ1 2754 aa7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGLV2-18A0A075B6J9 118 aa7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 H3BUA1 57 aa7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 CLUHP3Q96NS8 147 aa7.26□□□□□ -1.25
CSGALNACT1-201ENST00000332246 VSIG2Q96IQ7 327 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 CNFNQ9BYD5 112 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGHV1-58A0A0C4DH39 117 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 LOC100131303A0A0U1RQF7 123 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGHV3-33P01772 117 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 GATA3P23771 443 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 PIFOQ8TCI5 191 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 MAST4O15021 2626 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 K7EMT4 169 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 LGALS9O00182 355 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 DCANP1Q8TF63 244 aa7.25□□□□□ -1.25
CSGALNACT1-201ENST00000332246 TSHBP01222 138 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGHV3-30P01768 117 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGHV3-30-5P0DP03 117 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 PLA2G2AP14555 144 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 KRTAP10-9P60411 292 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 HERVK_113P63121 156 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 MAP6D1Q9H9H5 199 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 SLPIP03973 132 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 POM121L12Q8N7R1 296 aa7.24□□□□□ -1.25
CSGALNACT1-201ENST00000332246 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGIPA6NJ69 53 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 CFAP126Q5VTH2 177 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 GYPEP15421 78 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 HAMPP81172 84 aa7.23□□□□□ -1.25
CSGALNACT1-201ENST00000332246 SS18Q15532 418 aa7.22□□□□□ -1.25
CSGALNACT1-201ENST00000332246 SPANXA1Q9NS26 97 aa7.22□□□□□ -1.25
CSGALNACT1-201ENST00000332246 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
CSGALNACT1-201ENST00000332246 KLLNB2CW77 178 aa7.22□□□□□ -1.25
CSGALNACT1-201ENST00000332246 LECT2O14960 151 aa7.22□□□□□ -1.25
CSGALNACT1-201ENST00000332246 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
CSGALNACT1-201ENST00000332246 TEP1Q99973 2627 aaKnown RBP7.21□□□□□ -1.25
CSGALNACT1-201ENST00000332246 Q6ZSN1 163 aa7.21□□□□□ -1.25
CSGALNACT1-201ENST00000332246 ZMAT4Q9H898 229 aa7.21□□□□□ -1.25
CSGALNACT1-201ENST00000332246 PSMB8P28062 276 aa7.21□□□□□ -1.26
CSGALNACT1-201ENST00000332246 MRPL23Q16540 153 aaKnown RBP7.21□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DPH3Q96FX2 82 aa7.21□□□□□ -1.26
CSGALNACT1-201ENST00000332246 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.26
CSGALNACT1-201ENST00000332246 ADAMTSL4-AS1Q5T5F5 129 aa7.21□□□□□ -1.26
CSGALNACT1-201ENST00000332246 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 K7EQD1 137 aa7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 CUBNO60494 3623 aa7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DEFB135Q30KP9 77 aa7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 C14orf132Q9NPU4 83 aa7.2□□□□□ -1.26
CSGALNACT1-201ENST00000332246 COL27A1Q8IZC6 1860 aaPredicted RBP7.19□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DEFB113Q30KQ7 82 aa7.19□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DAD1P61803 113 aa7.19□□□□□ -1.26
CSGALNACT1-201ENST00000332246 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
CSGALNACT1-201ENST00000332246 ZANQ9Y493 2812 aa7.18□□□□□ -1.26
CSGALNACT1-201ENST00000332246 MIAQ16674 131 aa7.18□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DEFB114Q30KQ6 69 aa7.18□□□□□ -1.26
CSGALNACT1-201ENST00000332246 LINC00482Q8N8I6 264 aa7.18□□□□□ -1.26
CSGALNACT1-201ENST00000332246 CSMD1Q96PZ7 3565 aa7.18□□□□□ -1.26
CSGALNACT1-201ENST00000332246 LINC00694P0DN24 101 aa7.18□□□□□ -1.26
CSGALNACT1-201ENST00000332246 SOCS3O14543 225 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 TEX15Q9BXT5 2789 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 IGLV1-40P01703 118 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DAZ2Q13117 558 aaKnown RBP7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DAZ4Q86SG3 579 aaKnown RBP7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 COX7B2Q8TF08 81 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DAZ3Q9NR90 486 aaKnown RBP7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 J3QLI3 93 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 UBE2D1P51668 147 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 COX6A2Q02221 97 aa7.17□□□□□ -1.26
CSGALNACT1-201ENST00000332246 NCR3O14931 201 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 ATP6V0E2Q8NHE4 81 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 TRAV25A0A0B4J276 109 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 C9orf85Q96MD7 179 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 PRORYQ9H606 182 aa7.16□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DNAJC9-AS1A6NH13 148 aa7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 IGHV4-31P0DP07 118 aa7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 DEFB105AQ8NG35 78 aa7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 ZNF702PQ9H963 129 aa7.15□□□□□ -1.26
CSGALNACT1-201ENST00000332246 INAFM2P0DMQ5 153 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms