RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 UBE2D2P62837 147 aa15.29■□□□□ 0.04
LIMS2-201ENST00000324938 KRTAP10-3P60369 221 aa15.28■□□□□ 0.04
LIMS2-201ENST00000324938 DGAT2L7PQ6IED9 249 aa15.28■□□□□ 0.04
LIMS2-201ENST00000324938 VPS25Q9BRG1 176 aa15.28■□□□□ 0.04
LIMS2-201ENST00000324938 GEMIN7Q9H840 131 aaKnown RBP15.28■□□□□ 0.04
LIMS2-201ENST00000324938 TIRAPP58753 221 aa15.28■□□□□ 0.04
LIMS2-201ENST00000324938 IGLV5-45A0A087WSX0 123 aa15.27■□□□□ 0.04
LIMS2-201ENST00000324938 G3V4G9 280 aa15.27■□□□□ 0.04
LIMS2-201ENST00000324938 OVOL2Q9BRP0 275 aa15.27■□□□□ 0.04
LIMS2-201ENST00000324938 SPINK8P0C7L1 97 aa15.26■□□□□ 0.03
LIMS2-201ENST00000324938 NTM-AS1Q6ZSK4 140 aa15.26■□□□□ 0.03
LIMS2-201ENST00000324938 A4D1N5 150 aa15.26■□□□□ 0.03
LIMS2-201ENST00000324938 RPL24P83731 157 aaKnown RBP15.26■□□□□ 0.03
LIMS2-201ENST00000324938 SBSPONQ8IVN8 264 aa15.26■□□□□ 0.03
LIMS2-201ENST00000324938 CSDC2Q9Y534 153 aaKnown RBP15.26■□□□□ 0.03
LIMS2-201ENST00000324938 CIDEAO60543 219 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 LY6G6DO95868 133 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 LINC00694P0DN24 101 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 LITAFQ99732 161 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 NDUFA12Q9UI09 145 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 PRO0461Q9UI25 63 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 NOTCH3Q9UM47 2321 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE12JA6NER3 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE7O76087 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE12FP0CL80 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE12GP0CL81 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE12IP0CL82 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE4Q13068 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE5Q13069 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 WFDC2Q14508 124 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 GAGE13Q4V321 117 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 LYRM7Q5U5X0 104 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 MUSTN1Q8IVN3 82 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 PRO1854Q9UHT4 67 aa15.25■□□□□ 0.03
LIMS2-201ENST00000324938 LINC00482Q8N8I6 264 aa15.24■□□□□ 0.03
LIMS2-201ENST00000324938 CDKN2A-AS1Q9UH64 79 aa15.24■□□□□ 0.03
LIMS2-201ENST00000324938 TRGV2A0A075B6R0 118 aa15.23■□□□□ 0.03
LIMS2-201ENST00000324938 PF4P02776 101 aa15.23■□□□□ 0.03
LIMS2-201ENST00000324938 LOC107984156A0A0G2JMH3 177 aa15.23■□□□□ 0.03
LIMS2-201ENST00000324938 ZFAND6Q6FIF0 208 aa15.23■□□□□ 0.03
LIMS2-201ENST00000324938 FAM19A3Q7Z5A8 133 aa15.23■□□□□ 0.03
LIMS2-201ENST00000324938 ARL17AQ8IVW1 177 aa15.23■□□□□ 0.03
LIMS2-201ENST00000324938 A0A0B4J2C4 111 aa15.22■□□□□ 0.03
LIMS2-201ENST00000324938 TEX48A0A1B0GUV7 120 aa15.22■□□□□ 0.03
LIMS2-201ENST00000324938 TRBV6-4A0A1B0GX49 114 aa15.22■□□□□ 0.03
LIMS2-201ENST00000324938 EIF4EBP3O60516 100 aaPredicted RBP15.22■□□□□ 0.03
LIMS2-201ENST00000324938 SMAGPQ0VAQ4 97 aa15.22■□□□□ 0.03
LIMS2-201ENST00000324938 GTSF1LQ9H1H1 148 aa15.22■□□□□ 0.03
LIMS2-201ENST00000324938 GCN1Q92616 2671 aaKnown RBP15.21■□□□□ 0.03
LIMS2-201ENST00000324938 A8MZ25 164 aa15.21■□□□□ 0.03
LIMS2-201ENST00000324938 HERVK_113P63121 156 aa15.21■□□□□ 0.03
LIMS2-201ENST00000324938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-201ENST00000324938 SPANXDQ9BXN6 97 aa15.21■□□□□ 0.03
LIMS2-201ENST00000324938 SPANXCQ9NY87 97 aa15.21■□□□□ 0.03
LIMS2-201ENST00000324938 SFTA2Q6UW10 78 aa15.2■□□□□ 0.02
LIMS2-201ENST00000324938 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-201ENST00000324938 LINC00242Q5T6M2 205 aa15.2■□□□□ 0.02
LIMS2-201ENST00000324938 COX6A2Q02221 97 aa15.19■□□□□ 0.02
LIMS2-201ENST00000324938 MTURNQ8N3F0 131 aa15.19■□□□□ 0.02
LIMS2-201ENST00000324938 IGHV3-33P01772 117 aa15.18■□□□□ 0.02
LIMS2-201ENST00000324938 PSMB2P49721 201 aa15.18■□□□□ 0.02
LIMS2-201ENST00000324938 TMEM101Q96IK0 257 aa15.18■□□□□ 0.02
LIMS2-201ENST00000324938 TMEM243Q9BU79 118 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 CDC42SE2Q9NRR3 84 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 TRGV4A0A0C4DH28 118 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 IGLV5-39A0A0G2JS06 123 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 LOC100131303A0A0U1RQF7 123 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 MIAQ16674 131 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 ADAMTSL4-AS1Q5T5F5 129 aa15.17■□□□□ 0.02
LIMS2-201ENST00000324938 TRBV20-1A0A075B6N2 111 aa15.16■□□□□ 0.02
LIMS2-201ENST00000324938 NDUFA1O15239 70 aa15.16■□□□□ 0.02
LIMS2-201ENST00000324938 TIMM17BO60830 172 aa15.16■□□□□ 0.02
LIMS2-201ENST00000324938 PCP4P48539 62 aa15.16■□□□□ 0.02
LIMS2-201ENST00000324938 ETDBQ3ZM63 59 aa15.16■□□□□ 0.02
LIMS2-201ENST00000324938 UBE2L6O14933 153 aa15.15■□□□□ 0.02
LIMS2-201ENST00000324938 FHL2Q14192 279 aa15.15■□□□□ 0.02
LIMS2-201ENST00000324938 H7C423 109 aa15.14■□□□□ 0.01
LIMS2-201ENST00000324938 TCL1BO95988 128 aa15.14■□□□□ 0.01
LIMS2-201ENST00000324938 SH2D6Q7Z4S9 175 aa15.14■□□□□ 0.01
LIMS2-201ENST00000324938 ERG28Q9UKR5 140 aa15.14■□□□□ 0.01
LIMS2-201ENST00000324938 HECTD1Q9ULT8 2610 aa15.14■□□□□ 0.01
LIMS2-201ENST00000324938 TRAV13-1A0A0B4J241 112 aa15.13■□□□□ 0.01
LIMS2-201ENST00000324938 PRSS2P07478 247 aa15.13■□□□□ 0.01
LIMS2-201ENST00000324938 SMIM1B2RUZ4 78 aa15.12■□□□□ 0.01
LIMS2-201ENST00000324938 SMCPP49901 116 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-201ENST00000324938 INAFM1C9JVW0 142 aa15.11■□□□□ 0.01
LIMS2-201ENST00000324938 INSL3P51460 131 aa15.11■□□□□ 0.01
LIMS2-201ENST00000324938 KIR2DL5BQ8NHK3 375 aa15.11■□□□□ 0.01
LIMS2-201ENST00000324938 CRLF1O75462 422 aa15.11■□□□□ 0.01
LIMS2-201ENST00000324938 LINC00612Q8N6U2 182 aa15.11■□□□□ 0.01
LIMS2-201ENST00000324938 RNF183Q96D59 192 aa15.11■□□□□ 0.01
LIMS2-201ENST00000324938 OTOGQ6ZRI0 2925 aa15.1■□□□□ 0.01
LIMS2-201ENST00000324938 SCGB1C2P0DMR2 95 aa15.1■□□□□ 0.01
LIMS2-201ENST00000324938 J3QR89 54 aa15.1■□□□□ 0.01
LIMS2-201ENST00000324938 C2CD3Q4AC94 2353 aa15.09■□□□□ 0.01
LIMS2-201ENST00000324938 F5H768 121 aa15.09■□□□□ 0.01
LIMS2-201ENST00000324938 IFITM1P13164 125 aa15.09■□□□□ 0.01
LIMS2-201ENST00000324938 C9orf66Q5T8R8 295 aa15.08■□□□□ 0.01
LIMS2-201ENST00000324938 ATP6V0E2Q8NHE4 81 aa15.08■□□□□ 0.01
LIMS2-201ENST00000324938 H7C2G1 150 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms