RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ELANEP08246 267 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 Q6JHZ5 121 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 NCR3O14931 201 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 PLA2G5P39877 138 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 ZNF80P51504 273 aaPredicted RBP5.35□□□□□ -1.55
SMC1A-201ENST00000322213 DPH3Q96FX2 82 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 COX6B1P14854 86 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 ODF3Q96PU9 254 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 IGHV7-81A0A0B4J1V7 117 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 UBE2E2Q96LR5 201 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 MIR7-3HGQ8N6C7 128 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 Q8N7P7 452 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 RETNQ9HD89 108 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 PRAC2D3DTV9 90 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 PROP1O75360 226 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 HTN3P15516 51 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 CFAP46Q8IYW2 2715 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 LINC01546A6NGU7 62 aa5.35□□□□□ -1.55
SMC1A-201ENST00000322213 CHD7Q9P2D1 2997 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 FAM222AQ5U5X8 452 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 BRD3OSQ6XYD6 125 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 XCL2Q9UBD3 114 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 SPRNQ5BIV9 151 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 TRBV27A0A0K0K1C4 114 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 UBE2BP63146 152 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 CHD9Q3L8U1 2897 aa5.34□□□□□ -1.55
SMC1A-201ENST00000322213 DEFB130BP0DP73 79 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 DEFB130AP0DP74 79 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 URB1-AS1Q96HZ7 61 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 ANGP03950 147 aaKnown RBP5.33□□□□□ -1.56
SMC1A-201ENST00000322213 CFHR3Q02985 330 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 B4DSR2 109 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 ZNF22P17026 224 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-201ENST00000322213 TIRAPP58753 221 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 IGLV4-3A0A075B6K6 122 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 TRAV7A0A075B6U4 112 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 C4orf26Q17RF5 130 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 C16orf74Q96GX8 76 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 NOP10Q9NPE3 64 aaKnown RBP5.33□□□□□ -1.56
SMC1A-201ENST00000322213 C9orf85Q96MD7 179 aa5.33□□□□□ -1.56
SMC1A-201ENST00000322213 SPRY2O43597 315 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 IGFL3Q6UXB1 125 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 MKI67P46013 3256 aaKnown RBP5.32□□□□□ -1.56
SMC1A-201ENST00000322213 IGHV4-4A0A075B6R2 117 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 CTSZQ9UBR2 303 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 C5orf56Q8N8D9 126 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 LAMA1P25391 3075 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 PYGO1Q9Y3Y4 419 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 BPESC1Q9GZL8 116 aa5.32□□□□□ -1.56
SMC1A-201ENST00000322213 Q6ZS46 218 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 M0QY20 66 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 LY6HO94772 140 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 DIRC1Q969H9 104 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 FLNAP21333 2647 aaKnown RBP5.31□□□□□ -1.56
SMC1A-201ENST00000322213 UBE2AP49459 152 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 KLK5Q9Y337 293 aaPredicted RBP5.31□□□□□ -1.56
SMC1A-201ENST00000322213 IBA57-AS1B1ANH7 110 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 LINC01356Q8N9X3 169 aa5.31□□□□□ -1.56
SMC1A-201ENST00000322213 BPY2O14599 106 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 MIFP14174 115 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 GNLYP22749 145 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 LINC00467Q9BRT7 94 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 SIRPDQ9H106 197 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 NHLRC4P0CG21 123 aaPredicted RBP5.3□□□□□ -1.56
SMC1A-201ENST00000322213 RANBP2P49792 3224 aaKnown RBP5.3□□□□□ -1.56
SMC1A-201ENST00000322213 IGLV1-47P01700 117 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 CCKP06307 115 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 FRYLO94915 3013 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 DEFB105AQ8NG35 78 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 DKK4Q9UBT3 224 aa5.3□□□□□ -1.56
SMC1A-201ENST00000322213 C5orf38Q86SI9 138 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 MAST4O15021 2626 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 IGLV4-69A0A075B6H9 119 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 TRBV10-1A0A0K0K1A3 114 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 NDUFS5O43920 106 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 CHKB-CPT1BH3BT56 60 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 COX17Q14061 63 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 IGHV4-28A0A0C4DH34 117 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 K7EMT4 169 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 FAM215AQ9Y5M1 114 aa5.29□□□□□ -1.56
SMC1A-201ENST00000322213 A6NED7 52 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 PIP4P1Q86T03 277 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 MSMBP08118 114 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 GPHB5Q86YW7 130 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 PRB2P02812 416 aaPredicted RBP5.28□□□□□ -1.56
SMC1A-201ENST00000322213 DAZAP2Q15038 168 aaPredicted RBP5.28□□□□□ -1.56
SMC1A-201ENST00000322213 CDKN2A-AS1Q9UH64 79 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 CGB3P0DN86 165 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 CGB7P0DN87 165 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 TSHBP01222 138 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 APOC4P55056 127 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 Q8N9W7 124 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms